Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   MN200_RS03050 Genome accession   NZ_CP093968
Coordinates   647130..647528 (+) Length   132 a.a.
NCBI ID   WP_058868958.1    Uniprot ID   A0A0W8H2W5
Organism   Acinetobacter sp. LUNF3     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 642130..652528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MN200_RS03035 (MN200_03035) - 643118..645424 (+) 2307 WP_004979149.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  MN200_RS03040 (MN200_03040) - 645464..646231 (-) 768 WP_058868957.1 SDR family oxidoreductase -
  MN200_RS03045 (MN200_03045) mazG 646350..647111 (+) 762 WP_010325929.1 nucleoside triphosphate pyrophosphohydrolase -
  MN200_RS03050 (MN200_03050) comEA 647130..647528 (+) 399 WP_058868958.1 ComEA family DNA-binding protein Machinery gene
  MN200_RS03055 (MN200_03055) pcnB 647666..649135 (+) 1470 WP_058868959.1 polynucleotide adenylyltransferase PcnB -
  MN200_RS03060 (MN200_03060) folK 649132..649620 (+) 489 WP_004692303.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  MN200_RS03065 (MN200_03065) panB 649657..650466 (+) 810 WP_004692301.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  MN200_RS03070 (MN200_03070) panC 650470..651312 (+) 843 WP_058868960.1 pantoate--beta-alanine ligase -
  MN200_RS03075 (MN200_03075) rapZ 651339..652190 (+) 852 WP_004692298.1 RNase adapter RapZ -
  MN200_RS03080 (MN200_03080) - 652187..652456 (+) 270 WP_058868961.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14599.04 Da        Isoelectric Point: 10.8498

>NTDB_id=666081 MN200_RS03050 WP_058868958.1 647130..647528(+) (comEA) [Acinetobacter sp. LUNF3]
MIKIKVSLLIIALLLLSLLAWVPSSYAQSFDQNYLNWKAEQQAWDDRIQAPKSAKRSVSLVQAQPVSGANKISLNQASVD
QLQQLQGVGLKKAQAIVAYRQKQGPFKTIDELQQVRGIGPAIFAKNKTRLGL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=666081 MN200_RS03050 WP_058868958.1 647130..647528(+) (comEA) [Acinetobacter sp. LUNF3]
TTGATAAAAATAAAAGTAAGTTTGTTGATCATTGCGTTGTTATTACTGAGTTTGTTGGCTTGGGTGCCCAGTAGTTATGC
ACAGTCTTTTGATCAGAACTATCTGAACTGGAAAGCAGAGCAGCAGGCCTGGGATGATCGTATTCAGGCCCCCAAGAGCG
CGAAACGTTCAGTGTCTCTTGTTCAGGCCCAACCTGTGTCGGGCGCAAATAAAATTAGTTTAAATCAAGCCAGTGTCGAT
CAACTACAGCAACTTCAGGGCGTGGGTCTAAAAAAGGCCCAAGCAATTGTGGCCTATCGCCAGAAACAAGGGCCATTTAA
GACCATAGATGAACTACAACAGGTGCGCGGGATTGGACCGGCAATTTTTGCAAAAAATAAAACTCGTTTGGGCTTGTGA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(69-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0W8H2W5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

53.279

92.424

0.492
  comEA Acinetobacter baumannii D1279779

50.806

93.939

0.477
  comEA Acinetobacter baylyi ADP1

46.729

81.061

0.379