Detailed information NTG0665879

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG496_RS21585
• Genome accession: NZ_CP108730
• Coordinates: 4746569..4747855 (-)
• Length: 428 a.a.
• NCBI ID: WP_033285988.1
• Uniprot ID: A0ABW6MII4
• Organism: Streptomyces sp. NBC_00988
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4741569..4752855

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG496_RS21575 (OG496_21515)	-	4742710..4745334 (-)	2625	WP_405972040.1	valine--tRNA ligase	-
OG496_RS21580 (OG496_21520)	-	4745471..4746484 (+)	1014	WP_405972041.1	hypothetical protein	-
OG496_RS21585 (OG496_21525)	clpX	4746569..4747855 (-)	1287	WP_033285988.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG496_RS21590 (OG496_21530)	clpP	4748016..4748696 (-)	681	WP_365300432.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG496_RS21595 (OG496_21535)	clpP	4748747..4749349 (-)	603	WP_365300841.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG496_RS21600 (OG496_21540)	tig	4749719..4751098 (-)	1380	WP_405972042.1	trigger factor	-
OG496_RS21615 (OG496_21555)	-	4751688..4751882 (-)	195	WP_026151384.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46841.63 Da
• Isoelectric Point: 4.7360

>NTDB_id=665879 OG496_RS21585 WP_033285988.1 4746569..4747855(-) (clpX) [Streptomyces sp. NBC_00988]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELQAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=665879 OG496_RS21585 WP_033285988.1 4746569..4747855(-) (clpX) [Streptomyces sp. NBC_00988]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTTGAGGGCTACGTCGTCGGCCAGGAGTCG
GCGAAGAAGGCTCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCCAGAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTGCCGTTCGCGATCGCCGACGCGACCGCGCTCACGGAGGCGGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGTGATGTGAGCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAACACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCGGGTCTGGAGAAGCTCATCGAGTCCAGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGCTGCAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTGCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCACTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTCGTCCTGTCGAACGTCAACCCGACCCTGATCCCGCGCGACGCGCGGGGCCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.189	93.925	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516