Detailed information NTG0665535

Bioinformatically predicted

Overview

• Name: ssb
• Type: Machinery gene
• Locus tag: MOW07_RS06380
• Genome accession: NZ_CP093926
• Coordinates: 1345759..1346265 (-)
• Length: 168 a.a.
• NCBI ID: WP_311800555.1
• Uniprot ID: -
• Organism: Enterococcus hirae strain GDIAS-5
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1340759..1351265

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MOW07_RS06330 (MOW07_06335)	-	1340896..1341405 (-)	510	Protein_1250	transposase	-
MOW07_RS06335 (MOW07_06340)	-	1341407..1341649 (+)	243	Protein_1251	ATP-binding protein	-
MOW07_RS06340 (MOW07_06345)	-	1341809..1342240 (-)	432	WP_160232037.1	type II toxin-antitoxin system HicB family antitoxin	-
MOW07_RS06345 (MOW07_06350)	-	1342274..1342458 (-)	185	Protein_1253	type II toxin-antitoxin system HicA family toxin	-
MOW07_RS06350 (MOW07_06355)	-	1342551..1342730 (-)	180	WP_249456279.1	hypothetical protein	-
MOW07_RS13825	-	1342746..1342946 (-)	201	WP_002325534.1	hypothetical protein	-
MOW07_RS06355 (MOW07_06360)	-	1343111..1343818 (-)	708	WP_249456280.1	hypothetical protein	-
MOW07_RS06360 (MOW07_06365)	-	1343811..1344248 (-)	438	WP_010776932.1	hypothetical protein	-
MOW07_RS06365 (MOW07_06370)	-	1344264..1344515 (-)	252	WP_010776931.1	hypothetical protein	-
MOW07_RS06370 (MOW07_06375)	-	1344515..1344721 (-)	207	WP_010776930.1	hypothetical protein	-
MOW07_RS06375 (MOW07_06380)	-	1345166..1345426 (-)	261	WP_002325538.1	hypothetical protein	-
MOW07_RS06380 (MOW07_06385)	ssb	1345759..1346265 (-)	507	WP_311800555.1	single-stranded DNA-binding protein	Machinery gene
MOW07_RS06385 (MOW07_06390)	-	1346268..1346621 (-)	354	Protein_1262	nucleotidyl transferase AbiEii/AbiGii toxin family protein	-
MOW07_RS06390 (MOW07_06395)	-	1346723..1347199 (-)	477	WP_002305045.1	PTS glucose transporter subunit IIA	-
MOW07_RS06395 (MOW07_06400)	-	1347212..1348714 (-)	1503	WP_088775768.1	PTS transporter subunit EIIC	-
MOW07_RS06400 (MOW07_06405)	-	1348727..1349416 (-)	690	WP_160232030.1	N-acetylmannosamine-6-phosphate 2-epimerase	-
MOW07_RS06405 (MOW07_06410)	-	1349581..1350399 (+)	819	WP_081125614.1	MurR/RpiR family transcriptional regulator	-
MOW07_RS06410 (MOW07_06415)	-	1350440..1350679 (-)	240	WP_081125613.1	hypothetical protein	-

Sequence

Protein

• Length: 168 a.a.
• Molecular weight: 18923.80 Da
• Isoelectric Point: 10.0660

>NTDB_id=665535 MOW07_RS06380 WP_311800555.1 1345759..1346265(-) (ssb) [Enterococcus hirae strain GDIAS-5]
MINNVTLVGRLTKDPDLRYTASGTAVATFTLAVNRNFTNQNGNREADFINCVIWRKPAETMATLAKKGSLIGVVGRIQTR
TYDNQQGHRVYVTEVVADNFQLLESKSATEAVRTLINRLPIQVPLPLNNGIQTMDWTLHKLHLVDNQSILAMMIYRSKQF
FSIGCIRD

Nucleotide

• Length: 507 bp

>NTDB_id=665535 MOW07_RS06380 WP_311800555.1 1345759..1346265(-) (ssb) [Enterococcus hirae strain GDIAS-5]
ATGATCAATAATGTAACTTTAGTAGGACGATTAACCAAAGATCCCGACTTACGTTATACCGCAAGTGGCACAGCAGTGGC
TACTTTTACCCTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGAGAAGCTGATTTTATTAACTGTGTGATTT
GGCGCAAACCAGCAGAAACGATGGCGACATTAGCTAAAAAAGGTAGCTTGATCGGCGTTGTCGGACGGATTCAAACGCGG
ACTTATGACAACCAGCAAGGACACCGAGTGTACGTAACAGAAGTTGTGGCTGATAACTTCCAATTATTAGAAAGCAAATC
AGCGACAGAAGCCGTGCGCACGCTGATCAATCGTCTACCAATCCAAGTACCATTGCCTTTGAACAATGGGATACAAACAA
TGGATTGGACGCTTCACAAACTCCATTTGGTGGACAATCAATCGATATTAGCGATGATGATCTACCGTTCTAAGCAGTTT
TTTTCTATTGGTTGCATTCGTGACTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssb	Latilactobacillus sakei subsp. sakei 23K	73.636	65.476	0.482
ssbA	Bacillus subtilis subsp. subtilis str. 168	70.093	63.69	0.446
ssbB	Bacillus subtilis subsp. subtilis str. 168	59.459	66.071	0.393