Detailed information NTG0066493

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R27_RS22955
• Genome accession: NZ_AP022171
• Coordinates: 4798969..4799994 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain WP5-S18-ESBL-09
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4793969..4804994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R27_RS22935 (WP5S18E09_44480)	metJ	4795154..4795471 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
H7R27_RS22940 (WP5S18E09_44490)	yiiX	4795531..4796139 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
H7R27_RS22945 (WP5S18E09_44500)	rpmE	4796200..4796412 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R27_RS22950 (WP5S18E09_44510)	priA	4796615..4798813 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
H7R27_RS22955 (WP5S18E09_44520)	cytR	4798969..4799994 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
H7R27_RS22960 (WP5S18E09_44530)	ftsN	4800086..4801045 (+)	960	WP_000068834.1	cell division protein FtsN	-
H7R27_RS22965 (WP5S18E09_44540)	hslV	4801138..4801668 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R27_RS22970 (WP5S18E09_44550)	hslU	4801678..4803009 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
H7R27_RS22975 (WP5S18E09_44560)	menA	4803076..4804002 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R27_RS22980 (WP5S18E09_44570)	rraA	4804095..4804580 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R27_RS22985 (WP5S18E09_44580)	zapB	4804665..4804910 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=66493 H7R27_RS22955 WP_000644908.1 4798969..4799994(+) (cytR) [Escherichia coli strain WP5-S18-ESBL-09]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=66493 H7R27_RS22955 WP_000644908.1 4798969..4799994(+) (cytR) [Escherichia coli strain WP5-S18-ESBL-09]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625