Detailed information NTG0664902

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG316_RS16490
• Genome accession: NZ_CP108674
• Coordinates: 3745280..3746578 (-)
• Length: 432 a.a.
• NCBI ID: WP_326736179.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01022
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3740280..3751578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG316_RS16475 (OG316_16530)	-	3741171..3741371 (+)	201	Protein_3269	glycosyl transferase	-
OG316_RS16480 (OG316_16535)	-	3741447..3744068 (-)	2622	WP_326736177.1	valine--tRNA ligase	-
OG316_RS16485 (OG316_16540)	-	3744208..3745209 (+)	1002	WP_326736178.1	hypothetical protein	-
OG316_RS16490 (OG316_16545)	clpX	3745280..3746578 (-)	1299	WP_326736179.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG316_RS16495 (OG316_16550)	clpP	3746736..3747419 (-)	684	WP_306070064.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG316_RS16500 (OG316_16555)	-	3747500..3748105 (-)	606	WP_168713553.1	ATP-dependent Clp protease proteolytic subunit	-
OG316_RS16505 (OG316_16560)	tig	3748371..3749765 (-)	1395	WP_326736180.1	trigger factor	-
OG316_RS16520 (OG316_16575)	-	3750345..3750539 (-)	195	WP_123471025.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47394.18 Da
• Isoelectric Point: 4.8363

>NTDB_id=664902 OG316_RS16490 WP_326736179.1 3745280..3746578(-) (clpX) [Streptomyces sp. NBC_01022]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGSSRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELEFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
SDVVRNNVNPTLVPREPRTIGKGDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=664902 OG316_RS16490 WP_326736179.1 3745280..3746578(-) (clpX) [Streptomyces sp. NBC_01022]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTGGAGGGCTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTTCCAGCCG
TGACGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACGCTCCTCGCGCAGA
CACTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCGGGCGAGGGCGTCCAGCAGGCCC
TCCTCAAGATCCTTGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGAGTTCGAACGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACC
TCGGACGTGGTCCGCAACAACGTCAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGACGGGCG
GCACGAGAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.179	93.056	0.597
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516