Detailed information NTG0664692

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG510_RS25710
• Genome accession: NZ_CP108660
• Coordinates: 5727669..5728961 (+)
• Length: 430 a.a.
• NCBI ID: WP_164261170.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01089
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5722669..5733961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG510_RS25680 (OG510_25635)	-	5723669..5723863 (+)	195	WP_164261160.1	hypothetical protein	-
OG510_RS25695 (OG510_25650)	tig	5724460..5725854 (+)	1395	WP_406139878.1	trigger factor	-
OG510_RS25700 (OG510_25655)	-	5726172..5726777 (+)	606	WP_164261228.1	ATP-dependent Clp protease proteolytic subunit	-
OG510_RS25705 (OG510_25660)	clpP	5726829..5727512 (+)	684	WP_164261167.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG510_RS25710 (OG510_25665)	clpX	5727669..5728961 (+)	1293	WP_164261170.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG510_RS25715 (OG510_25670)	-	5729046..5730044 (-)	999	WP_406139880.1	hypothetical protein	-
OG510_RS25720 (OG510_25675)	-	5730183..5732804 (+)	2622	WP_406139881.1	valine--tRNA ligase	-
OG510_RS25725 (OG510_25680)	-	5732912..5733925 (-)	1014	WP_406139882.1	rod shape-determining protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47088.85 Da
• Isoelectric Point: 4.7809

>NTDB_id=664692 OG510_RS25710 WP_164261170.1 5727669..5728961(+) (clpX) [Streptomyces sp. NBC_01089]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGSSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=664692 OG510_RS25710 WP_164261170.1 5727669..5728961(+) (clpX) [Streptomyces sp. NBC_01089]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATTGAGGAAGAGCTCGCGGAGACCT
CCGAAGTGCGGTGGGAGGAACTGCCCAAACCGCGTGAGATCTATGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCAGCAGCCG
CGAGGACGCCATCGAACTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCGGGCAAGACGCTGCTCGCCCAGA
CACTGGCCCGGATGCTCAATGTCCCGTTCGCCATCGCGGACGCGACAGCGCTCACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACCACCGCTTCGGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACCACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGCCTGGAGCGGATCATCGAGTCCCGGGCGGGCGC
GAAGGGCATCGGCTTCGGTGCGACCATCCGCTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCCTGACCTCGGTGCACAACCTGGACCGC
GAGGCCCTGCTGCAGATCCTGGTCGAGCCGCGGAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGTCCCGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGCGGTCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTCGTCCGGGACAATGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTCGGCAACGACGGGCGGCACGA
GAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.488	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512