Detailed information NTG0664658

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: MOQ58_RS21875
• Genome accession: NZ_CP093428
• Coordinates: 4790617..4792839 (-)
• Length: 740 a.a.
• NCBI ID: WP_280161926.1
• Uniprot ID: -
• Organism: Pseudomonas migulae strain 8R6
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4785617..4797839

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MOQ58_RS21840 (MOQ58_21795)	murB	4785985..4787004 (-)	1020	WP_008031565.1	UDP-N-acetylmuramate dehydrogenase	-
MOQ58_RS21845 (MOQ58_21800)	-	4787001..4787471 (-)	471	WP_280161924.1	low molecular weight protein-tyrosine-phosphatase	-
MOQ58_RS21850 (MOQ58_21805)	kdsB	4787471..4788235 (-)	765	WP_192420260.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
MOQ58_RS21855 (MOQ58_21810)	-	4788232..4788417 (-)	186	WP_007945752.1	Trm112 family protein	-
MOQ58_RS21860 (MOQ58_21815)	lpxK	4788442..4789452 (-)	1011	WP_008031560.1	tetraacyldisaccharide 4'-kinase	-
MOQ58_RS21865 (MOQ58_21820)	-	4789452..4789883 (-)	432	WP_280161925.1	biopolymer transporter ExbD	-
MOQ58_RS21870 (MOQ58_21825)	exbB	4789880..4790518 (-)	639	WP_008045105.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
MOQ58_RS21875 (MOQ58_21830)	comA	4790617..4792839 (-)	2223	WP_280161926.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
MOQ58_RS21880 (MOQ58_21835)	-	4792975..4793493 (+)	519	WP_280161927.1	DUF2062 domain-containing protein	-
MOQ58_RS21885 (MOQ58_21840)	-	4794374..4795153 (-)	780	WP_008032943.1	ABC transporter permease	-
MOQ58_RS21890 (MOQ58_21845)	-	4795150..4796082 (-)	933	WP_008032944.1	ABC transporter ATP-binding protein	-
MOQ58_RS21895 (MOQ58_21850)	-	4796216..4796839 (-)	624	WP_280161928.1	glutathione S-transferase	-
MOQ58_RS21900 (MOQ58_21855)	-	4796883..4797542 (-)	660	WP_280161929.1	transglutaminase family protein	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 81799.98 Da
• Isoelectric Point: 10.0688

>NTDB_id=664658 MOQ58_RS21875 WP_280161926.1 4790617..4792839(-) (comA) [Pseudomonas migulae strain 8R6]
MRTGMMALALGLLALRFFPVLPPVWLWLVLPVTGLMALPFRTYPLAFFLFGISWAGANAQWALDDRLPAHLDGETRWVEG
RVTGLPQNNDGVVRFELTDVRSRQAEVPQRMRLAWYDGPPVNSGERWRLAVKLKRPAGLLNPHAFDYDAWLLAQRIGATG
TIKDGERLREARWAWRDSIRQRLQTVDAQGRTGALIALVLGDGAGLSREDWQVLQDTGTVHLLVISGQHIGLLAGVVYLL
IAGLARYGLWPNRLPWLPWACALAFAAALGYGLLAGFEVPVRRACVMIGLVLLWRLRFRHLGAWWPLLLALNAVLLLDPL
ASLQPGFWLSFAAVAVLIFTFGGRLGPWRWWQTWTRAQWLIAIGLGPLLLVLGLPISLSGPVANLLAVPWISLLVLPPAL
LGTLLLPLPYVGEGLLWLAGGLIDWLFKGLGLLAGQLPAWVPVATPLWIWALGMLGAFLLLMPRGVPLRPLGWPLLLLLV
FPPRPLLPEGIAEVWQLDVGQGLAILVRTRHHTLLYDTGPRFGDFDLGERVVLPAMRKLGVNELDLMLISHADADHAGGA
RAVANGLPIKLVLSGDPLALPAELHADACESGQQWTWDGVRFQLWQWPSATDRNQKSCVLQIEANGERLLLTGDIDSAAE
RALLDSPLAVPTDWLQAPHHGSRSSSSMALLTALQPKAVLISRGNGNSFGHPHPTVMARYKKRGMEIHDSAEQGAIRLHL
GRFDPPWTMRQERRFWRSTQ

Nucleotide

• Length: 2223 bp

>NTDB_id=664658 MOQ58_RS21875 WP_280161926.1 4790617..4792839(-) (comA) [Pseudomonas migulae strain 8R6]
ATGCGCACAGGGATGATGGCGCTGGCGTTGGGTCTGCTGGCCCTGCGTTTTTTTCCGGTATTACCGCCGGTCTGGTTATG
GCTGGTGTTGCCCGTAACGGGTTTGATGGCGCTGCCGTTTCGCACGTACCCATTGGCGTTTTTTCTGTTCGGCATCAGTT
GGGCCGGCGCAAATGCGCAGTGGGCGCTGGATGATCGTTTGCCAGCGCATCTCGATGGCGAAACCCGTTGGGTCGAAGGG
CGGGTGACCGGTTTGCCGCAGAACAATGACGGGGTTGTGCGCTTCGAACTGACAGACGTCCGGTCGCGACAGGCCGAGGT
GCCGCAACGGATGCGCCTGGCCTGGTATGACGGACCGCCGGTCAACAGTGGTGAACGCTGGCGGCTCGCGGTGAAGTTGA
AGCGTCCTGCCGGGCTGCTCAATCCTCATGCCTTCGATTACGACGCCTGGCTGCTGGCGCAACGCATCGGCGCTACCGGA
ACGATCAAGGACGGTGAGCGGCTCAGGGAAGCCCGATGGGCCTGGCGCGACAGCATCCGCCAGCGATTGCAAACCGTGGA
TGCCCAAGGGCGAACCGGGGCGTTGATTGCGCTGGTGCTGGGGGACGGCGCCGGGCTGAGTCGTGAGGATTGGCAGGTGT
TGCAAGACACCGGCACCGTGCATTTGCTGGTGATTTCCGGACAGCACATCGGTTTGCTGGCGGGGGTGGTTTACCTGCTG
ATTGCCGGGCTCGCTCGTTATGGGCTGTGGCCGAACCGTTTGCCGTGGCTGCCATGGGCCTGCGCACTGGCATTCGCCGC
CGCCCTTGGTTACGGACTGCTGGCCGGGTTCGAAGTGCCGGTGCGGCGGGCCTGCGTGATGATCGGTCTGGTGCTGTTGT
GGCGCCTGCGATTTCGTCACCTTGGCGCCTGGTGGCCGCTGTTGCTGGCACTCAACGCTGTTTTGTTGCTGGATCCGCTG
GCGAGCCTGCAACCGGGTTTTTGGCTGTCCTTCGCCGCAGTGGCGGTGTTGATCTTCACCTTCGGCGGTCGCTTGGGGCC
GTGGCGATGGTGGCAAACATGGACCCGCGCTCAATGGCTGATCGCAATCGGCCTGGGCCCGTTGCTACTGGTGTTGGGAT
TGCCGATCAGTCTCAGCGGGCCGGTCGCCAATCTGCTGGCGGTGCCCTGGATCAGTTTGCTGGTATTGCCACCGGCCTTG
CTGGGAACTCTGTTGTTGCCGCTGCCGTATGTGGGCGAGGGCTTGTTGTGGTTGGCGGGTGGGCTGATCGACTGGCTGTT
CAAGGGCCTTGGGTTACTGGCCGGTCAATTGCCCGCGTGGGTGCCCGTGGCGACTCCATTGTGGATATGGGCACTGGGCA
TGCTCGGCGCGTTTCTTCTGTTAATGCCTCGTGGTGTACCGCTGCGCCCGTTGGGTTGGCCGTTGTTGCTGTTGCTGGTT
TTTCCACCACGGCCACTTTTGCCCGAGGGCATCGCCGAAGTCTGGCAATTGGATGTCGGCCAAGGGTTGGCGATTCTGGT
GCGAACTCGCCATCACACGTTGTTGTATGACACCGGACCACGTTTTGGCGACTTCGATCTAGGCGAGCGAGTGGTCCTGC
CAGCGATGCGCAAACTCGGCGTGAACGAACTCGACCTGATGTTGATCAGCCATGCCGACGCCGATCACGCTGGTGGTGCG
CGAGCGGTTGCCAATGGTTTGCCGATAAAGCTGGTGCTCAGCGGTGATCCCTTGGCGCTGCCCGCCGAATTGCACGCCGA
TGCCTGCGAGAGTGGCCAGCAATGGACCTGGGACGGCGTGAGGTTTCAGCTCTGGCAATGGCCTTCGGCCACGGACCGCA
ATCAAAAGTCCTGCGTGCTGCAAATCGAAGCCAATGGCGAGCGATTATTGCTGACCGGAGACATCGACAGCGCCGCCGAG
CGCGCCCTGCTCGACAGCCCGCTCGCAGTGCCCACCGATTGGTTGCAGGCGCCGCACCACGGTAGCCGCAGCTCGTCGTC
GATGGCGTTGCTCACTGCGTTGCAACCCAAAGCCGTGCTGATCTCTCGCGGCAACGGCAATTCGTTCGGTCACCCGCACC
CCACGGTCATGGCCCGTTATAAAAAACGCGGTATGGAAATCCATGACAGTGCCGAGCAGGGCGCCATCCGTCTGCACCTC
GGACGCTTCGATCCCCCGTGGACGATGCGTCAAGAACGGCGTTTCTGGCGTTCCACGCAATAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (22-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-681)

• Competence protein (Competence) (198-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	63.877	96.892	0.619
comA	Ralstonia pseudosolanacearum GMI1000	34.36	100	0.392