Detailed information NTG0664532

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG596_RS25135
• Genome accession: NZ_CP108654
• Coordinates: 5614959..5616260 (+)
• Length: 433 a.a.
• NCBI ID: WP_056785577.1
• Uniprot ID: A0ABS4VBV7
• Organism: Streptomyces sp. NBC_01102
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5609959..5621260

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG596_RS25105 (OG596_25045)	-	5610895..5611089 (+)	195	WP_405393228.1	hypothetical protein	-
OG596_RS25120 (OG596_25060)	tig	5611741..5613150 (+)	1410	WP_405390844.1	trigger factor	-
OG596_RS25125 (OG596_25065)	-	5613425..5614030 (+)	606	WP_164494208.1	ATP-dependent Clp protease proteolytic subunit	-
OG596_RS25130 (OG596_25070)	clpP	5614119..5614802 (+)	684	WP_019992624.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG596_RS25135 (OG596_25075)	clpX	5614959..5616260 (+)	1302	WP_056785577.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG596_RS25140 (OG596_25080)	-	5616340..5617329 (-)	990	WP_405390845.1	hypothetical protein	-
OG596_RS25145 (OG596_25085)	-	5617467..5620088 (+)	2622	WP_405390846.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 433 a.a.
• Molecular weight: 47458.26 Da
• Isoelectric Point: 4.7809

>NTDB_id=664532 OG596_RS25135 WP_056785577.1 5614959..5616260(+) (clpX) [Streptomyces sp. NBC_01102]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNDDGGRHEKSA

Nucleotide

• Length: 1302 bp

>NTDB_id=664532 OG596_RS25135 WP_056785577.1 5614959..5616260(+) (clpX) [Streptomyces sp. NBC_01102]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAGCTCCCCAAGCCGCGGGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGCGCGAATCG
CGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACACTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGCCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGTTCGAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCTGTACTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTGGTCGAGCCGCGTAACGCCCTGGTGAAGCAGTACCAACGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACGGGCGCACGTGGTCTGC
GCGCGATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACA
CCGGACGTCGTCCGCAACAACGTCAACCCGACACTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGACGGCGG
CCGCCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	92.841	0.594
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.15	0.508