Detailed information NTG0664014

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG379_RS13365
• Genome accession: NZ_CP108613
• Coordinates: 2883113..2884411 (-)
• Length: 432 a.a.
• NCBI ID: WP_103516222.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01166
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2878113..2889411

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG379_RS13355 (OG379_13380)	-	2878640..2881258 (-)	2619	WP_405662363.1	valine--tRNA ligase	-
OG379_RS13360 (OG379_13385)	-	2881396..2882415 (+)	1020	WP_405662365.1	hypothetical protein	-
OG379_RS13365 (OG379_13390)	clpX	2883113..2884411 (-)	1299	WP_103516222.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG379_RS13370 (OG379_13395)	clpP	2884568..2885251 (-)	684	WP_031091966.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG379_RS13375 (OG379_13400)	-	2885319..2885924 (-)	606	WP_031091967.1	ATP-dependent Clp protease proteolytic subunit	-
OG379_RS13380 (OG379_13405)	tig	2886210..2887607 (-)	1398	WP_405662367.1	trigger factor	-
OG379_RS13395 (OG379_13420)	-	2888158..2888508 (-)	351	WP_405662370.1	DUF1330 domain-containing protein	-
OG379_RS13400 (OG379_13425)	-	2888657..2888851 (-)	195	WP_073746901.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47343.18 Da
• Isoelectric Point: 4.8277

>NTDB_id=664014 OG379_RS13365 WP_103516222.1 2883113..2884411(-) (clpX) [Streptomyces sp. NBC_01166]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=664014 OG379_RS13365 WP_103516222.1 2883113..2884411(-) (clpX) [Streptomyces sp. NBC_01166]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCAGAGACCT
CCGAAGTGCGGTGGGAGGAGCTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGCGCGAATCG
TGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGTGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTATCCGGCGAGGGCGTCCAGCAGGCCC
TCCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGACGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGGGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGT
GAGGCACTGCTCCAGATCCTGGTCGAGCCGCGTAACGCGCTGGTGAAGCAGTACCAGCGTCTGTTCGAACTCGACGGTGT
CGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGTCTGC
GCGCCATCATGGAAGAGGTCCTGCAGTCCGTGATGTACGAGGTTCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
CCGGACGTCGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAACCGCGCACGATCGGCAAGAACGACGGCGGCCG
CCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509