Detailed information NTG0663785

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG414_RS11780
• Genome accession: NZ_CP108605
• Coordinates: 2543984..2545282 (-)
• Length: 432 a.a.
• NCBI ID: WP_099172566.1
• Uniprot ID: A0ABU8A0E2
• Organism: Streptomyces sp. NBC_01174
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2538984..2550282

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG414_RS11765 (OG414_11760)	-	2539516..2542137 (-)	2622	WP_405629582.1	valine--tRNA ligase	-
OG414_RS11770 (OG414_11765)	-	2542275..2543291 (+)	1017	WP_405629585.1	hypothetical protein	-
OG414_RS11775 (OG414_11770)	-	2543504..2543776 (-)	273	WP_405629587.1	hypothetical protein	-
OG414_RS11780 (OG414_11775)	clpX	2543984..2545282 (-)	1299	WP_099172566.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG414_RS11785 (OG414_11780)	clpP	2545439..2546122 (-)	684	WP_031091966.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG414_RS11790 (OG414_11785)	-	2546190..2546795 (-)	606	WP_099172994.1	ATP-dependent Clp protease proteolytic subunit	-
OG414_RS11795 (OG414_11790)	tig	2547096..2548499 (-)	1404	WP_129262943.1	trigger factor	-
OG414_RS11810 (OG414_11805)	-	2549066..2549413 (-)	348	WP_319353081.1	DUF1330 domain-containing protein	-
OG414_RS11815 (OG414_11810)	-	2549533..2549727 (-)	195	WP_073746901.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47329.15 Da
• Isoelectric Point: 4.8249

>NTDB_id=663785 OG414_RS11780 WP_099172566.1 2543984..2545282(-) (clpX) [Streptomyces sp. NBC_01174]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYDVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=663785 OG414_RS11780 WP_099172566.1 2543984..2545282(-) (clpX) [Streptomyces sp. NBC_01174]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAGCTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGCGCGAATCG
CGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGTCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTATCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGACGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGTCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
GAAGGGCATCGGTTTCGGCGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTGGTCGAGCCGCGTAACGCGCTGGTGAAGCAGTACCAAAGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGTCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGACGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
CCGGACGTCGTGCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGCCG
CCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.37	0.507