Detailed information NTG0663735

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG199_RS27390
• Genome accession: NZ_CP108600
• Coordinates: 6344539..6345825 (+)
• Length: 428 a.a.
• NCBI ID: WP_266699180.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01176
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6339539..6350825

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG199_RS27360 (OG199_27360)	-	6340154..6340486 (+)	333	WP_405831726.1	hypothetical protein	-
OG199_RS27375 (OG199_27375)	tig	6341098..6342483 (+)	1386	WP_351717453.1	trigger factor	-
OG199_RS27380 (OG199_27380)	clpP	6342965..6343570 (+)	606	WP_060897745.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG199_RS27385 (OG199_27385)	clpP	6343698..6344378 (+)	681	WP_351717451.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG199_RS27390 (OG199_27390)	clpX	6344539..6345825 (+)	1287	WP_266699180.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG199_RS27395 (OG199_27395)	-	6345906..6346883 (-)	978	WP_356802670.1	hypothetical protein	-
OG199_RS27400 (OG199_27400)	-	6347019..6349649 (+)	2631	WP_356802668.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46822.63 Da
• Isoelectric Point: 4.7331

>NTDB_id=663735 OG199_RS27390 WP_266699180.1 6344539..6345825(+) (clpX) [Streptomyces sp. NBC_01176]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELEEKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
AALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=663735 OG199_RS27390 WP_266699180.1 6344539..6345825(+) (clpX) [Streptomyces sp. NBC_01176]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAAACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTGGAGGGGTACGTCGTCGGCCAGGAGGCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCAGGTGAGAACGGCGGCGGTCAGAACCG
GGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGTCCCACGGGCTCCGGCAAGACGCTGCTCGCCCAGA
CGCTCGCCCGGATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGCTACGTGGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGTGAGGGTGTCCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCTCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCCCGCGCGGGGGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGCTGGAGGAGAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCATCACGTCGGTCCACAACCTCGACCGC
GCGGCGCTCCTCCAGATCCTCGTCGAGCCGCGCAACGCGCTCGTCAAGCAGTACCAGCGTCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTCGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTCCCCTCGCGCAAGGACGTGGCGAGGGTCGTCATCACG
GCCGACGTGGTCCTGTCGAACGTCAACCCGACACTCATCCCGCGGGACGCCCGCGGGCGGGGCCCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521