Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   AS4_RS09050 Genome accession   NZ_AP014630
Coordinates   1973954..1974664 (-) Length   236 a.a.
NCBI ID   WP_004721139.1    Uniprot ID   A0A077KYT9
Organism   Acinetobacter guillouiae strain NBRC 110550     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1968954..1979664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AS4_RS09030 (AS4_18180) - 1970346..1971137 (+) 792 WP_096733933.1 M48 family metallopeptidase -
  AS4_RS09035 (AS4_18190) - 1971278..1971583 (+) 306 WP_004820960.1 hypothetical protein -
  AS4_RS09040 (AS4_18200) - 1971695..1972480 (+) 786 WP_004721143.1 M48 family metallopeptidase -
  AS4_RS09045 (AS4_18210) - 1972575..1973624 (-) 1050 WP_096733934.1 NADP(H)-dependent aldo-keto reductase -
  AS4_RS09050 (AS4_18220) crp 1973954..1974664 (-) 711 WP_004721139.1 cAMP-activated global transcriptional regulator CRP Regulator
  AS4_RS09055 (AS4_18230) - 1974816..1975238 (+) 423 WP_004721138.1 OsmC family protein -
  AS4_RS09060 (AS4_18240) - 1975423..1976226 (-) 804 WP_406565193.1 peptidoglycan DD-metalloendopeptidase family protein -
  AS4_RS09065 (AS4_18250) - 1976483..1978450 (-) 1968 WP_096733936.1 family 2A encapsulin nanocompartment cargo protein cysteine desulfurase -
  AS4_RS09070 (AS4_18260) - 1978425..1979357 (-) 933 WP_004721119.1 family 2A encapsulin nanocompartment shell protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26563.18 Da        Isoelectric Point: 4.6726

>NTDB_id=66366 AS4_RS09050 WP_004721139.1 1973954..1974664(-) (crp) [Acinetobacter guillouiae strain NBRC 110550]
MSSNFAQLSTDALSPGQLPESVKALLKRAHINRFPKRSTIIDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEQNPQRTAEVRTRDVCEIAEISYDNFHEISKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDVSLEESNFSEDELSTDDE

Nucleotide


Download         Length: 711 bp        

>NTDB_id=66366 AS4_RS09050 WP_004721139.1 1973954..1974664(-) (crp) [Acinetobacter guillouiae strain NBRC 110550]
ATGTCTTCTAATTTTGCACAACTTAGTACAGATGCTTTGTCTCCTGGTCAACTACCTGAGTCAGTCAAAGCTTTGCTCAA
AAGAGCCCACATCAATCGTTTTCCAAAACGCTCAACGATTATTGATGCAGGTTCAGAGTCAAAATCCCTGTATTTAATTT
TAAAAGGTTCAGTTTCAATTATTTTACGTGAAGATGATGAGCGTGAAATTGTTGTTGCATATTTGAACCCTGGGGACTTT
TTCGGGGAAATGGGATTATTTGAGCAAAATCCACAACGTACTGCGGAAGTAAGAACCCGTGACGTATGTGAAATTGCTGA
AATTTCATATGATAATTTCCACGAAATTAGTAAACAATATCCTGACTTAAGTTATGCCGTATTTGCACAACTTGTTCGTC
GTTTAAAAAATACAACACGCAAAGTAACTGACCTTGCATTTATTGATGTATCTGGTCGTATTGCACGTTGTTTAATTGAT
CTTTCAGCACAGCCTGAAGCGATGATTTTGCCAAACGGCCGTCAAATCCGCATTACTCGCCAAGAAATTGGTCGTATCGT
GGGTTGTTCCCGTGAAATGGTTGGTCGTGTTCTAAAAACACTTGAAGAACAAGGCATGATCGAAACCGACGGTAAAGCCA
TCCTTATATTTGATGTATCTTTGGAAGAATCTAATTTTTCTGAAGACGAACTAAGCACAGATGATGAATAA

Domains

Predicted by InterproScan.

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-219)

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077KYT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.304

97.458

0.89
  crp Vibrio cholerae strain A1552

48.293

86.864

0.419
  crp Haemophilus influenzae Rd KW20

48.705

81.78

0.398

Multiple sequence alignment