Detailed information NTG0663231

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG452_RS23780
• Genome accession: NZ_CP108569
• Coordinates: 5195729..5197021 (+)
• Length: 430 a.a.
• NCBI ID: WP_327297608.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01197
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5190729..5202021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG452_RS23750 (OG452_23735)	-	5191751..5191945 (+)	195	WP_164261160.1	hypothetical protein	-
OG452_RS23765 (OG452_23750)	tig	5192532..5193935 (+)	1404	WP_327297607.1	trigger factor	-
OG452_RS23770 (OG452_23755)	-	5194230..5194838 (+)	609	WP_327299750.1	ATP-dependent Clp protease proteolytic subunit	-
OG452_RS23775 (OG452_23760)	clpP	5194889..5195572 (+)	684	WP_164261167.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG452_RS23780 (OG452_23765)	clpX	5195729..5197021 (+)	1293	WP_327297608.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG452_RS23785 (OG452_23770)	-	5197130..5198161 (-)	1032	WP_327297609.1	hypothetical protein	-
OG452_RS23790 (OG452_23775)	-	5198498..5201119 (+)	2622	WP_327297610.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47042.82 Da
• Isoelectric Point: 4.7809

>NTDB_id=663231 OG452_RS23780 WP_327297608.1 5195729..5197021(+) (clpX) [Streptomyces sp. NBC_01197]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=663231 OG452_RS23780 WP_327297608.1 5195729..5197021(+) (clpX) [Streptomyces sp. NBC_01197]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATTGATCTCTGCAATGAGATCATTGAGGAAGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAACCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCGCCGGCCG
CGAGGACGCGATCGAACTCGCCAAGTCCAACATCCTGTTGCTGGGCCCCACCGGCTCGGGCAAGACGCTGCTCGCCCAGA
CACTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGCAAGAGCGAGAACCCGTCGATCACGCGTGATGTCTCTGGCGAGGGTGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACCGCCTCGGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACCACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCCACCATCCGCTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCCTGACCTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGTCCCGCGCTTGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGTGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAATCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACC
GCGGACGTCGTCCGGGACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTCGGCAACGACGGGCGCCACGA
GAAGTCGGCCTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.488	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512