Detailed information NTG0662927

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG457_RS29635
• Genome accession: NZ_CP108554
• Coordinates: 6428882..6430168 (+)
• Length: 428 a.a.
• NCBI ID: WP_030008569.1
• Uniprot ID: A0ABQ3SUV3
• Organism: Streptomyces sp. NBC_01207
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6423882..6435168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG457_RS29620 (OG457_29625)	tig	6425712..6427115 (+)	1404	WP_327385409.1	trigger factor	-
OG457_RS29625 (OG457_29630)	-	6427392..6428009 (+)	618	WP_327385410.1	ATP-dependent Clp protease proteolytic subunit	-
OG457_RS29630 (OG457_29635)	clpP	6428063..6428728 (+)	666	WP_150257432.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG457_RS29635 (OG457_29640)	clpX	6428882..6430168 (+)	1287	WP_030008569.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG457_RS29640 (OG457_29645)	-	6430335..6430610 (+)	276	WP_327385411.1	hypothetical protein	-
OG457_RS29645 (OG457_29650)	-	6430665..6431600 (-)	936	WP_327385412.1	hypothetical protein	-
OG457_RS29650 (OG457_29655)	-	6431728..6434349 (+)	2622	WP_327385413.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46962.87 Da
• Isoelectric Point: 4.7778

>NTDB_id=662927 OG457_RS29635 WP_030008569.1 6428882..6430168(+) (clpX) [Streptomyces sp. NBC_01207]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SEVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=662927 OG457_RS29635 WP_030008569.1 6428882..6430168(+) (clpX) [Streptomyces sp. NBC_01207]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTTTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATTGAAGAGGAGCTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTGCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACGCTGCTCGCGCAGA
CCCTCGCCCGCATGCTGAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TCCTGAAGATCCTGGAAGGCACGACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGTGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGACGCCTCCCCGTGCTGACCTCCGTGCACAACCTGGACCGT
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACT
TCGGAGGTGGTCCGCTCCAACGTCAACCCGACGCTGGTCCCCCGGATCGTCCCGAAGGACCAGGGCCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.925	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519