Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   AS19_RS00545 Genome accession   NZ_AP014613
Coordinates   118108..118491 (-) Length   127 a.a.
NCBI ID   WP_011587407.1    Uniprot ID   Q0VTI6
Organism   Alcanivorax sp. NBRC 101098     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 113108..123491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AS19_RS00525 (AS19_01070) - 114151..115029 (-) 879 WP_011587403.1 protein-glutamate O-methyltransferase CheR -
  AS19_RS00530 (AS19_01080) - 115061..117088 (-) 2028 WP_011587404.1 methyl-accepting chemotaxis protein -
  AS19_RS00535 (AS19_01090) - 117147..117695 (-) 549 WP_011587405.1 chemotaxis protein CheW -
  AS19_RS00540 (AS19_01100) pilH 117707..118075 (-) 369 WP_011587406.1 twitching motility response regulator PilH -
  AS19_RS00545 (AS19_01110) pilG 118108..118491 (-) 384 WP_011587407.1 twitching motility response regulator PilG Regulator
  AS19_RS00550 (AS19_01120) gshB 118804..119757 (+) 954 WP_011587408.1 glutathione synthase -
  AS19_RS00555 (AS19_01130) - 119876..120754 (+) 879 WP_011587409.1 TonB family protein -
  AS19_RS00560 (AS19_01150) - 120928..121488 (+) 561 WP_035461621.1 YqgE/AlgH family protein -
  AS19_RS00565 (AS19_01160) ruvX 121568..121969 (+) 402 WP_011587411.1 Holliday junction resolvase RuvX -
  AS19_RS00570 (AS19_01170) - 121972..122898 (-) 927 WP_046961605.1 sterol desaturase family protein -

Sequence


Protein


Download         Length: 127 a.a.        Molecular weight: 14008.28 Da        Isoelectric Point: 7.8533

>NTDB_id=66199 AS19_RS00545 WP_011587407.1 118108..118491(-) (pilG) [Alcanivorax sp. NBRC 101098]
MTDNFQDLKVMVIDDSKTIRRTAETLLKKAGCEVITATDGFDALAKIADSKPHIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSKDGLFDKAKGRIVGSDEYLTKPFSKDELLGAIRQHING

Nucleotide


Download         Length: 384 bp        

>NTDB_id=66199 AS19_RS00545 WP_011587407.1 118108..118491(-) (pilG) [Alcanivorax sp. NBRC 101098]
ATGACTGACAATTTCCAAGACCTCAAGGTAATGGTAATCGACGATTCCAAGACGATTCGTCGTACCGCCGAGACTTTGTT
AAAGAAAGCAGGCTGTGAAGTAATCACGGCCACCGATGGCTTCGATGCCTTGGCCAAAATCGCCGACAGCAAGCCCCATA
TCATTTTCGTCGATATCATGATGCCGCGTCTCGATGGTTATCAGACCTGCGCGCTGATCAAAAATAATAGCGCCTTCAAG
GCAACCCCGGTGATCATGCTGTCGTCCAAAGATGGCCTGTTTGACAAGGCCAAGGGACGCATCGTTGGTTCCGATGAGTA
CCTGACCAAGCCGTTTTCCAAAGACGAGCTTTTGGGTGCCATTCGTCAGCATATCAATGGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q0VTI6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.953

100

0.78

  vicR Streptococcus mutans UA159

41.88

92.126

0.386

  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37


Multiple sequence alignment