Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | SRT_RS09440 | Genome accession | NZ_AP014612 |
| Coordinates | 1921499..1923922 (-) | Length | 807 a.a. |
| NCBI ID | WP_128833887.1 | Uniprot ID | A0A1L7LLV4 |
| Organism | Streptococcus troglodytae strain TKU 31 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1916499..1928922
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SRT_RS09425 (SRT_19120) | rpsJ | 1917271..1917579 (-) | 309 | WP_002262341.1 | 30S ribosomal protein S10 | - |
| SRT_RS09430 (SRT_19140) | - | 1917895..1918580 (+) | 686 | Protein_1834 | helix-turn-helix domain-containing protein | - |
| SRT_RS09435 (SRT_19150) | - | 1918780..1921137 (-) | 2358 | Protein_1835 | glycoside hydrolase family 68 protein | - |
| SRT_RS11405 | - | 1921147..1921194 (-) | 48 | Protein_1836 | KxYKxGKxW signal peptide domain-containing protein | - |
| SRT_RS09440 (SRT_19160) | clpC | 1921499..1923922 (-) | 2424 | WP_128833887.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| SRT_RS09445 (SRT_19170) | ctsR | 1923919..1924383 (-) | 465 | WP_128833888.1 | transcriptional regulator CtsR | - |
| SRT_RS09450 (SRT_19180) | - | 1924555..1925014 (+) | 460 | Protein_1839 | COG2426 family protein | - |
| SRT_RS09455 (SRT_19190) | - | 1925220..1927016 (-) | 1797 | WP_128833889.1 | DHA2 family efflux MFS transporter permease subunit | - |
| SRT_RS09460 (SRT_19200) | - | 1927195..1927737 (+) | 543 | WP_002277501.1 | TetR/AcrR family transcriptional regulator | - |
| SRT_RS09465 (SRT_19210) | - | 1927879..1928421 (-) | 543 | WP_128833890.1 | TetR/AcrR family transcriptional regulator | - |
Sequence
Protein
Download Length: 807 a.a. Molecular weight: 89614.04 Da Isoelectric Point: 6.7054
>NTDB_id=66193 SRT_RS09440 WP_128833887.1 1921499..1923922(-) (clpC) [Streptococcus troglodytae strain TKU 31]
MIDYSLKMQEVFRLAQFEAARFESSYLESWHVLLAMVEIDSSVAGLSFAEFEADVRFKDYQAAAILAIGKRPKTPSHDIN
LLEQSHALQRTLAEAAAISQVTHAKEVGTEHVLFAMLLNPNLLATRILELVGFQAKDDGESIRLLGLRKVIERYAGFSKE
DIKAIFEMRKPKKVKNSSSFSDLMKPPSVTGELADFTRDLTELARQGRLEPVIGREQEISRIVQILSRKTKNNPVLVGDA
GVGKTALAYGLAQRIVDSAVPFELADMKVLELDMMSVVAGTRFRGDFEERMNQIIADIEADGHIVLFIDELHTIMGSGSG
IDSTLDAANILKPALARGSLRTIGATTQEEYQKHIEKDAALSRRFAKVTIEEPSEEEAYQILLGLKKSYETYHHVIISDA
AVMAAVKGAHRYLSGKNLPDSAIDLLDEASATVQGLVKKQAPAYLTDLDHALINNDYQLAKRLLKKEKKPLLKKRVEVKE
EDILATLSRLSGIPVSKLTQADSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGKRPIGSFMFLGPTGVGKTE
LAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNILLQV
LDDGVLTDSRGRNVDFSNTIIIMTSNLGATALRDDKTVGFGAKSFSQDYKAMESRILEELKKTYRPEFINRIDEKVVFHN
LGQEDIRHIVKIMVAPLIAHLAEQGITLKFQPSALKHLALAGYDAEMGARPLRRTLQTEVEDKLAELILSGKLASGQTLK
IGIQKEN
MIDYSLKMQEVFRLAQFEAARFESSYLESWHVLLAMVEIDSSVAGLSFAEFEADVRFKDYQAAAILAIGKRPKTPSHDIN
LLEQSHALQRTLAEAAAISQVTHAKEVGTEHVLFAMLLNPNLLATRILELVGFQAKDDGESIRLLGLRKVIERYAGFSKE
DIKAIFEMRKPKKVKNSSSFSDLMKPPSVTGELADFTRDLTELARQGRLEPVIGREQEISRIVQILSRKTKNNPVLVGDA
GVGKTALAYGLAQRIVDSAVPFELADMKVLELDMMSVVAGTRFRGDFEERMNQIIADIEADGHIVLFIDELHTIMGSGSG
IDSTLDAANILKPALARGSLRTIGATTQEEYQKHIEKDAALSRRFAKVTIEEPSEEEAYQILLGLKKSYETYHHVIISDA
AVMAAVKGAHRYLSGKNLPDSAIDLLDEASATVQGLVKKQAPAYLTDLDHALINNDYQLAKRLLKKEKKPLLKKRVEVKE
EDILATLSRLSGIPVSKLTQADSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGKRPIGSFMFLGPTGVGKTE
LAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNILLQV
LDDGVLTDSRGRNVDFSNTIIIMTSNLGATALRDDKTVGFGAKSFSQDYKAMESRILEELKKTYRPEFINRIDEKVVFHN
LGQEDIRHIVKIMVAPLIAHLAEQGITLKFQPSALKHLALAGYDAEMGARPLRRTLQTEVEDKLAELILSGKLASGQTLK
IGIQKEN
Nucleotide
Download Length: 2424 bp
>NTDB_id=66193 SRT_RS09440 WP_128833887.1 1921499..1923922(-) (clpC) [Streptococcus troglodytae strain TKU 31]
ATGATTGATTACTCATTAAAAATGCAGGAAGTCTTTCGATTGGCGCAGTTTGAAGCGGCTCGTTTTGAAAGTTCCTATTT
AGAAAGCTGGCATGTCCTTCTTGCAATGGTAGAAATTGATTCTTCAGTGGCTGGTCTGAGTTTTGCAGAGTTTGAAGCAG
ATGTTCGTTTTAAAGATTATCAGGCTGCTGCTATTTTGGCTATTGGTAAAAGACCCAAGACCCCAAGTCATGATATTAAT
CTTTTAGAACAATCGCATGCTTTACAACGAACTTTGGCTGAAGCCGCTGCTATTAGTCAGGTGACACATGCTAAAGAAGT
TGGAACAGAACATGTTTTATTTGCCATGTTACTTAATCCTAATCTTTTAGCAACTCGTATCTTAGAGCTAGTTGGTTTTC
AGGCCAAAGATGATGGAGAGTCCATCCGTCTTTTGGGTCTGCGAAAAGTGATTGAACGTTATGCTGGCTTTTCCAAAGAG
GACATTAAGGCCATCTTTGAAATGCGTAAACCTAAAAAGGTCAAAAATAGCAGCAGCTTTTCTGATTTAATGAAGCCACC
TAGCGTTACAGGTGAACTAGCTGATTTTACAAGGGATTTGACGGAGTTGGCAAGACAAGGTCGTTTAGAACCTGTTATTG
GTCGTGAACAAGAAATCTCACGGATAGTTCAAATTTTAAGCCGTAAGACAAAAAATAACCCTGTTTTAGTTGGTGATGCT
GGTGTTGGAAAGACTGCTTTGGCTTACGGCCTTGCTCAACGCATTGTGGATAGTGCTGTTCCTTTTGAATTGGCAGATAT
GAAAGTGCTAGAGCTCGACATGATGAGTGTTGTTGCAGGGACTCGTTTTCGTGGTGATTTTGAGGAACGAATGAATCAAA
TTATTGCAGACATTGAAGCTGATGGTCACATTGTTCTCTTCATTGATGAACTGCATACCATTATGGGTTCAGGCAGTGGT
ATTGACAGTACGTTGGATGCTGCTAATATTCTTAAACCAGCTTTAGCGCGCGGCAGTCTTAGAACGATTGGAGCGACTAC
TCAAGAGGAGTATCAAAAGCATATTGAAAAAGATGCCGCTCTTTCTCGTCGTTTTGCTAAGGTAACTATTGAAGAGCCAA
GTGAAGAAGAAGCTTATCAGATCTTGCTTGGTTTAAAGAAAAGTTATGAAACTTATCATCATGTTATTATTTCTGATGCA
GCCGTAATGGCGGCAGTCAAAGGAGCACATCGTTATTTAAGTGGTAAGAATTTACCTGATTCGGCTATCGATCTTTTAGA
TGAAGCCAGTGCAACTGTTCAAGGCTTAGTGAAAAAACAGGCACCAGCTTATTTGACAGATTTAGATCATGCTCTTATCA
ATAACGATTACCAATTAGCTAAGCGTTTGTTGAAAAAGGAGAAGAAGCCTCTGCTTAAGAAACGAGTTGAAGTCAAAGAA
GAAGATATCCTAGCAACTCTCAGCAGACTTTCAGGCATTCCTGTCAGCAAACTCACACAGGCTGATAGTAAAAAATATCT
TAATCTTGAAAGAGAATTGCATAAGCGTGTGATTGGTCAAGATGATGCGGTATCCAGCATTAGTCGTGCTATTCGCCGCA
ATCAATCTGGAATTCGGGTAGGCAAACGTCCCATTGGCTCTTTCATGTTTTTGGGACCGACAGGTGTTGGTAAAACAGAA
CTTGCTAAGGCTTTGGCAGAAGTGCTTTTTGATGATGAGTCGGCTCTTATTCGTTTTGATATGAGCGAATATATGGAAAA
ATTTGCAGCTTCTCGCCTTAATGGAGCTCCTCCGGGTTACGTGGGGTATGAAGAAGGCGGTGAGTTGACAGAAAAGGTTC
GTAACAAACCTTACTCTGTACTTCTTTTTGATGAGGTGGAGAAAGCTCATCCAGATATTTTTAATATCTTACTTCAAGTA
CTTGATGATGGTGTTTTGACAGATAGCCGTGGTCGTAACGTTGATTTTTCAAATACGATTATTATCATGACCTCTAATTT
GGGTGCGACTGCGCTTCGTGATGACAAAACCGTTGGTTTTGGAGCTAAAAGCTTTTCTCAGGATTATAAGGCTATGGAAA
GTCGTATTTTAGAAGAATTGAAAAAGACTTATCGACCTGAATTCATTAATCGTATTGATGAAAAAGTTGTCTTTCATAAT
CTTGGTCAAGAAGACATACGCCATATTGTTAAAATTATGGTCGCTCCATTGATTGCCCATTTGGCTGAACAGGGAATTAC
ACTTAAGTTTCAGCCTTCAGCATTGAAACATTTAGCTCTGGCAGGTTATGATGCTGAAATGGGGGCACGTCCTTTGCGTC
GGACACTTCAGACAGAAGTGGAAGATAAGTTAGCAGAGCTTATTCTCTCAGGAAAACTAGCCAGTGGACAGACTCTGAAA
ATTGGTATCCAAAAAGAAAATTAA
ATGATTGATTACTCATTAAAAATGCAGGAAGTCTTTCGATTGGCGCAGTTTGAAGCGGCTCGTTTTGAAAGTTCCTATTT
AGAAAGCTGGCATGTCCTTCTTGCAATGGTAGAAATTGATTCTTCAGTGGCTGGTCTGAGTTTTGCAGAGTTTGAAGCAG
ATGTTCGTTTTAAAGATTATCAGGCTGCTGCTATTTTGGCTATTGGTAAAAGACCCAAGACCCCAAGTCATGATATTAAT
CTTTTAGAACAATCGCATGCTTTACAACGAACTTTGGCTGAAGCCGCTGCTATTAGTCAGGTGACACATGCTAAAGAAGT
TGGAACAGAACATGTTTTATTTGCCATGTTACTTAATCCTAATCTTTTAGCAACTCGTATCTTAGAGCTAGTTGGTTTTC
AGGCCAAAGATGATGGAGAGTCCATCCGTCTTTTGGGTCTGCGAAAAGTGATTGAACGTTATGCTGGCTTTTCCAAAGAG
GACATTAAGGCCATCTTTGAAATGCGTAAACCTAAAAAGGTCAAAAATAGCAGCAGCTTTTCTGATTTAATGAAGCCACC
TAGCGTTACAGGTGAACTAGCTGATTTTACAAGGGATTTGACGGAGTTGGCAAGACAAGGTCGTTTAGAACCTGTTATTG
GTCGTGAACAAGAAATCTCACGGATAGTTCAAATTTTAAGCCGTAAGACAAAAAATAACCCTGTTTTAGTTGGTGATGCT
GGTGTTGGAAAGACTGCTTTGGCTTACGGCCTTGCTCAACGCATTGTGGATAGTGCTGTTCCTTTTGAATTGGCAGATAT
GAAAGTGCTAGAGCTCGACATGATGAGTGTTGTTGCAGGGACTCGTTTTCGTGGTGATTTTGAGGAACGAATGAATCAAA
TTATTGCAGACATTGAAGCTGATGGTCACATTGTTCTCTTCATTGATGAACTGCATACCATTATGGGTTCAGGCAGTGGT
ATTGACAGTACGTTGGATGCTGCTAATATTCTTAAACCAGCTTTAGCGCGCGGCAGTCTTAGAACGATTGGAGCGACTAC
TCAAGAGGAGTATCAAAAGCATATTGAAAAAGATGCCGCTCTTTCTCGTCGTTTTGCTAAGGTAACTATTGAAGAGCCAA
GTGAAGAAGAAGCTTATCAGATCTTGCTTGGTTTAAAGAAAAGTTATGAAACTTATCATCATGTTATTATTTCTGATGCA
GCCGTAATGGCGGCAGTCAAAGGAGCACATCGTTATTTAAGTGGTAAGAATTTACCTGATTCGGCTATCGATCTTTTAGA
TGAAGCCAGTGCAACTGTTCAAGGCTTAGTGAAAAAACAGGCACCAGCTTATTTGACAGATTTAGATCATGCTCTTATCA
ATAACGATTACCAATTAGCTAAGCGTTTGTTGAAAAAGGAGAAGAAGCCTCTGCTTAAGAAACGAGTTGAAGTCAAAGAA
GAAGATATCCTAGCAACTCTCAGCAGACTTTCAGGCATTCCTGTCAGCAAACTCACACAGGCTGATAGTAAAAAATATCT
TAATCTTGAAAGAGAATTGCATAAGCGTGTGATTGGTCAAGATGATGCGGTATCCAGCATTAGTCGTGCTATTCGCCGCA
ATCAATCTGGAATTCGGGTAGGCAAACGTCCCATTGGCTCTTTCATGTTTTTGGGACCGACAGGTGTTGGTAAAACAGAA
CTTGCTAAGGCTTTGGCAGAAGTGCTTTTTGATGATGAGTCGGCTCTTATTCGTTTTGATATGAGCGAATATATGGAAAA
ATTTGCAGCTTCTCGCCTTAATGGAGCTCCTCCGGGTTACGTGGGGTATGAAGAAGGCGGTGAGTTGACAGAAAAGGTTC
GTAACAAACCTTACTCTGTACTTCTTTTTGATGAGGTGGAGAAAGCTCATCCAGATATTTTTAATATCTTACTTCAAGTA
CTTGATGATGGTGTTTTGACAGATAGCCGTGGTCGTAACGTTGATTTTTCAAATACGATTATTATCATGACCTCTAATTT
GGGTGCGACTGCGCTTCGTGATGACAAAACCGTTGGTTTTGGAGCTAAAAGCTTTTCTCAGGATTATAAGGCTATGGAAA
GTCGTATTTTAGAAGAATTGAAAAAGACTTATCGACCTGAATTCATTAATCGTATTGATGAAAAAGTTGTCTTTCATAAT
CTTGGTCAAGAAGACATACGCCATATTGTTAAAATTATGGTCGCTCCATTGATTGCCCATTTGGCTGAACAGGGAATTAC
ACTTAAGTTTCAGCCTTCAGCATTGAAACATTTAGCTCTGGCAGGTTATGATGCTGAAATGGGGGCACGTCCTTTGCGTC
GGACACTTCAGACAGAAGTGGAAGATAAGTTAGCAGAGCTTATTCTCTCAGGAAAACTAGCCAGTGGACAGACTCTGAAA
ATTGGTATCCAAAAAGAAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
97.643 |
99.876 |
0.975 |
| clpC | Streptococcus thermophilus LMD-9 |
72.064 |
100 |
0.722 |
| clpC | Streptococcus thermophilus LMG 18311 |
71.941 |
100 |
0.721 |
| clpC | Streptococcus pneumoniae TIGR4 |
66.832 |
99.752 |
0.667 |
| clpC | Streptococcus pneumoniae Rx1 |
66.832 |
99.752 |
0.667 |
| clpC | Streptococcus pneumoniae D39 |
66.832 |
99.752 |
0.667 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.093 |
100 |
0.503 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.788 |
100 |
0.45 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.36 |
77.447 |
0.367 |
| clpE | Streptococcus pneumoniae Rx1 |
47.36 |
77.447 |
0.367 |
| clpE | Streptococcus pneumoniae D39 |
47.36 |
77.447 |
0.367 |
| clpE | Streptococcus pneumoniae R6 |
47.36 |
77.447 |
0.367 |
| clpE | Streptococcus mutans UA159 |
46.88 |
77.447 |
0.363 |
| clpA | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
38.543 |
93.556 |
0.361 |