Detailed information NTG0661880

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG324_RS16775
• Genome accession: NZ_CP108512
• Coordinates: 3666207..3667496 (-)
• Length: 429 a.a.
• NCBI ID: WP_327428701.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01236
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3661207..3672496

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG324_RS16765 (OG324_16765)	-	3661970..3664594 (-)	2625	WP_327428699.1	valine--tRNA ligase	-
OG324_RS16770 (OG324_16770)	-	3664731..3665669 (+)	939	WP_327428700.1	hypothetical protein	-
OG324_RS16775 (OG324_16775)	clpX	3666207..3667496 (-)	1290	WP_327428701.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG324_RS16780 (OG324_16780)	clpP	3667657..3668337 (-)	681	WP_327428702.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG324_RS16785 (OG324_16785)	clpP	3668444..3669049 (-)	606	WP_327435020.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG324_RS16790 (OG324_16790)	tig	3669490..3670890 (-)	1401	WP_327428703.1	trigger factor	-
OG324_RS16805 (OG324_16805)	-	3671493..3671999 (-)	507	WP_327428704.1	hypothetical protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47114.90 Da
• Isoelectric Point: 4.8249

>NTDB_id=661880 OG324_RS16775 WP_327428701.1 3666207..3667496(-) (clpX) [Streptomyces sp. NBC_01236]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSTGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELQSKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARNGRGPGEQKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=661880 OG324_RS16775 WP_327428701.1 3666207..3667496(-) (clpX) [Streptomyces sp. NBC_01236]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAAACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACAGCACGGGTCAAAACCG
CGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCGGGCAAGACGCTCCTGGCCCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTGGAGAACATCCTGCTCAAGCTCATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCTCGCAAGAGCGAGAACCCGTCGATCACGCGGGATGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACCACCGCCTCTGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCGCGGGCGGGAGC
GAAGGGAATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAACTGCAGTCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTCCCGGTCATCACGTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAACTCGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGAGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTCGTTCACTCGAACGTGAACCCGACGCTGATTCCGCGCGATGCGCGCAACGGCCGCGGGCCGGGCGAGCAGAA
GACGGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.706	0.585
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	95.804	0.52