Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | MM522_RS18945 | Genome accession | NZ_CP093067 |
| Coordinates | 3685176..3685466 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain ATC-3 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3680176..3690466
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MM522_RS18905 (MM522_18905) | darA | 3680199..3680528 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| MM522_RS18910 (MM522_18910) | yaaR | 3680541..3680981 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| MM522_RS18915 (MM522_18915) | holB | 3680993..3681982 (+) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| MM522_RS18920 (MM522_18920) | ricT | 3681985..3682812 (+) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| MM522_RS18925 (MM522_18925) | yabA | 3682827..3683186 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| MM522_RS18930 (MM522_18930) | trmNF | 3683245..3683988 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| MM522_RS18935 (MM522_18935) | yazA | 3683975..3684274 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| MM522_RS18940 (MM522_18940) | rsmI | 3684249..3685127 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| MM522_RS18945 (MM522_18945) | abrB | 3685176..3685466 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| MM522_RS18950 (MM522_18950) | metG | 3685961..3687955 (+) | 1995 | WP_014662479.1 | methionine--tRNA ligase | - |
| MM522_RS18955 (MM522_18955) | dayD | 3688035..3688802 (+) | 768 | WP_029726393.1 | TatD family hydrolase | - |
| MM522_RS18960 (MM522_18960) | yabE | 3688958..3690271 (+) | 1314 | WP_029726392.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=661881 MM522_RS18945 WP_003226760.1 3685176..3685466(-) (abrB) [Bacillus subtilis strain ATC-3]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=661881 MM522_RS18945 WP_003226760.1 3685176..3685466(-) (abrB) [Bacillus subtilis strain ATC-3]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |