Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   MM522_RS16765 Genome accession   NZ_CP093067
Coordinates   3254073..3254192 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain ATC-3     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3249073..3259192
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MM522_RS16745 (MM522_16745) albG 3249237..3249938 (+) 702 WP_029318695.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  MM522_RS16750 (MM522_16750) ywhL 3249944..3251320 (-) 1377 WP_101172255.1 YncE family protein -
  MM522_RS16755 (MM522_16755) ywhK 3251359..3252714 (-) 1356 WP_015250986.1 YncE family protein -
  MM522_RS16760 (MM522_16760) rapF 3252944..3254089 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  MM522_RS16765 (MM522_16765) phrF 3254073..3254192 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  MM522_RS16770 (MM522_16770) - 3254419..3254895 (+) 477 WP_015384936.1 hypothetical protein -
  MM522_RS16775 (MM522_16775) - 3255155..3255841 (+) 687 WP_241495663.1 hypothetical protein -
  MM522_RS16780 (MM522_16780) - 3257317..3257964 (+) 648 WP_029318689.1 ABC transporter ATP-binding protein -
  MM522_RS16785 (MM522_16785) - 3257957..3258520 (+) 564 WP_015483840.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=661875 MM522_RS16765 WP_009968329.1 3254073..3254192(+) (phrF) [Bacillus subtilis strain ATC-3]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=661875 MM522_RS16765 WP_009968329.1 3254073..3254192(+) (phrF) [Bacillus subtilis strain ATC-3]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487