Detailed information NTG0661805

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG251_RS12465
• Genome accession: NZ_CP108508
• Coordinates: 2815958..2817259 (-)
• Length: 433 a.a.
• NCBI ID: WP_073723175.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01237
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2810958..2822259

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG251_RS12455 (OG251_12485)	-	2812107..2814728 (-)	2622	WP_326677221.1	valine--tRNA ligase	-
OG251_RS12460 (OG251_12490)	-	2814867..2815862 (+)	996	WP_326677222.1	hypothetical protein	-
OG251_RS12465 (OG251_12495)	clpX	2815958..2817259 (-)	1302	WP_073723175.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG251_RS12470 (OG251_12500)	clpP	2817416..2818099 (-)	684	WP_073723177.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG251_RS12475 (OG251_12505)	-	2818179..2818784 (-)	606	WP_073723895.1	ATP-dependent Clp protease proteolytic subunit	-
OG251_RS12480 (OG251_12510)	tig	2819076..2820470 (-)	1395	WP_073723179.1	trigger factor	-
OG251_RS12495 (OG251_12525)	-	2821011..2822150 (-)	1140	WP_326677223.1	tyrosine-type recombinase/integrase	-

Sequence

Protein

• Length: 433 a.a.
• Molecular weight: 47414.25 Da
• Isoelectric Point: 4.8305

>NTDB_id=661805 OG251_RS12465 WP_073723175.1 2815958..2817259(-) (clpX) [Streptomyces sp. NBC_01237]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNDGGGRHEKSA

Nucleotide

• Length: 1302 bp

>NTDB_id=661805 OG251_RS12465 WP_073723175.1 2815958..2817259(-) (clpX) [Streptomyces sp. NBC_01237]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTCCGTTGGGAAGAGCTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCG
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGCGCCAATCG
CGAGGACGCGATCGAGCTCGCCAAGTCGAACATCCTGCTGCTGGGCCCCACCGGTTCCGGCAAGACGCTCCTCGCGCAGA
CACTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGTGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGTGATGTCTCCGGCGAGGGTGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGTCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGTTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTTCCCGTGCTGACCTCGGTGCACAACCTGGACCGC
GAAGCGCTGCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAAAGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACGGGCGCACGCGGTCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTGGTCATCACC
CCGGACGTCGTCCGCAACAACGTCAACCCCACGCTGGTCCCGCGCGAGCCGCGCACCATCGGCAAGAACGACGGCGGCGG
CCGCCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	92.841	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.15	0.506