Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   SRT_RS02800 Genome accession   NZ_AP014612
Coordinates   520572..521573 (+) Length   333 a.a.
NCBI ID   WP_128832953.1    Uniprot ID   -
Organism   Streptococcus troglodytae strain TKU 31     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 515572..526573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SRT_RS02775 (SRT_05240) - 515875..516267 (-) 393 WP_128832951.1 VOC family protein -
  SRT_RS02780 - 516302..516965 (-) 664 Protein_497 NAD(P)H-dependent oxidoreductase -
  SRT_RS02785 (SRT_05260) - 517029..517922 (+) 894 WP_128834014.1 ROK family protein -
  SRT_RS02790 (SRT_05270) - 518658..519239 (+) 582 WP_161940017.1 CDP-archaeol synthase -
  SRT_RS02795 (SRT_05280) - 519330..520409 (-) 1080 WP_128832952.1 M24 family metallopeptidase -
  SRT_RS02800 (SRT_05290) ccpA 520572..521573 (+) 1002 WP_128832953.1 catabolite control protein A Regulator
  SRT_RS02805 (SRT_05300) - 521722..523182 (+) 1461 WP_128832954.1 alpha-amylase -
  SRT_RS02810 (SRT_05310) - 523293..524291 (+) 999 WP_128832955.1 glycosyltransferase family 4 protein -
  SRT_RS02815 (SRT_05320) - 524293..525626 (+) 1334 Protein_504 glycosyltransferase family 4 protein -
  SRT_RS10400 - 525705..525897 (+) 193 Protein_505 hypothetical protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36598.79 Da        Isoelectric Point: 6.1785

>NTDB_id=66167 SRT_RS02800 WP_128832953.1 520572..521573(+) (ccpA) [Streptococcus troglodytae strain TKU 31]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEINVINTLFAKQVDGIIFMGHHLTEKVRAEFSRARTPVVLAGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPLIDDINGKVRLAGYKEGLKKQGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTE

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=66167 SRT_RS02800 WP_128832953.1 520572..521573(+) (ccpA) [Streptococcus troglodytae strain TKU 31]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTAGCAAGTAAGAAAACGACTACGGTAGGTGTCGTTATCCCTAATATTGCTAATGCTTATTTTTCC
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAATCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATCATTTTTATGGGGCATCATTTAACTGAAA
AAGTTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTAGCAGGTACTGTAGATCTGGAGCATCAACTACCTAGT
GTTAATATTGATCATAGTAAGGCGGCACAAGATGCCGTAGCCCTATTGGCCAAGCATCATGATAAGATTGCTTTTGTATC
GGGCCCTCTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGCTATAAAGAAGGCCTGAAAAAGCAGGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGCTATCAGTTAGCGCAACGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTGCTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAGGACTTTGAAATTATCACGAGTAATGATTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGCCAGC
CGATTTATGATTTAGGAGCAGTCGCTATGCGTATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCACGGTATTAGAGAAAGAGGAACAACTGAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.012

99.7

0.778
  ccpA Streptococcus pneumoniae D39

75.904

99.7

0.757
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.287

99.399

0.55

Multiple sequence alignment