Detailed information NTG0661439

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG357_RS26085
• Genome accession: NZ_CP108474
• Coordinates: 5754889..5756172 (+)
• Length: 427 a.a.
• NCBI ID: WP_024755522.1
• Uniprot ID: A0ABW6XJ92
• Organism: Streptomyces sp. NBC_01255
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5749889..5761172

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG357_RS26050 (OG357_26055)	-	5750517..5750711 (+)	195	WP_024755527.1	hypothetical protein	-
OG357_RS26055 (OG357_26060)	-	5750736..5751173 (-)	438	WP_329623460.1	amphi-Trp domain-containing protein	-
OG357_RS26070 (OG357_26075)	tig	5751762..5753147 (+)	1386	WP_329623461.1	trigger factor	-
OG357_RS26075 (OG357_26080)	clpP	5753390..5754007 (+)	618	WP_329623462.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG357_RS26080 (OG357_26085)	clpP	5754070..5754732 (+)	663	WP_037641831.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG357_RS26085 (OG357_26090)	clpX	5754889..5756172 (+)	1284	WP_024755522.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG357_RS26090 (OG357_26095)	-	5756249..5757217 (-)	969	WP_329623463.1	hypothetical protein	-
OG357_RS26095 (OG357_26100)	-	5757356..5759977 (+)	2622	WP_329623464.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46672.50 Da
• Isoelectric Point: 4.8738

>NTDB_id=661439 OG357_RS26085 WP_024755522.1 5754889..5756172(+) (clpX) [Streptomyces sp. NBC_01255]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPRIVKNDGRHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=661439 OG357_RS26085 WP_024755522.1 5754889..5756172(+) (clpX) [Streptomyces sp. NBC_01255]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGTAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGATACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGGGCGGGGCG
GGACGACGCCATCGAACTGGCGAAGTCCAACATTCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTGGCCCAGA
CGCTGGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACGCGTGACGTGAGCGGTGAGGGCGTCCAGCAGGCCC
TCCTCAAGATCCTGGAAGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGAGGGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACCATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTCCCCGTCCTCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGAACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTCGTCCGGAACAACGTCAACCCGACGCTGGTCCCCCGGATCGTGAAGAACGACGGCAGGCACGAGAAGTCGGC
CTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	94.145	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.528	96.253	0.515