Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   ML603_RS02555 Genome accession   NZ_CP092887
Coordinates   483077..484078 (+) Length   333 a.a.
NCBI ID   WP_003049927.1    Uniprot ID   A0A9X5LWR8
Organism   Streptococcus dysgalactiae subsp. equisimilis strain Karl     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 478077..489078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ML603_RS02530 (ML603_02530) - 478129..479055 (-) 927 WP_138125006.1 glycosyltransferase family 2 protein -
  ML603_RS02535 (ML603_02535) - 479192..480376 (-) 1185 WP_241067469.1 DNA/RNA non-specific endonuclease -
  ML603_RS02540 (ML603_02540) - 480722..481099 (-) 378 WP_065358885.1 VOC family protein -
  ML603_RS02545 (ML603_02545) - 481109..481774 (-) 666 WP_241067470.1 NAD(P)H-dependent oxidoreductase -
  ML603_RS02550 (ML603_02550) - 481818..482903 (-) 1086 WP_138125014.1 Xaa-Pro peptidase family protein -
  ML603_RS02555 (ML603_02555) ccpA 483077..484078 (+) 1002 WP_003049927.1 catabolite control protein A Regulator
  ML603_RS02560 (ML603_02560) - 484232..485695 (+) 1464 WP_241067472.1 alpha-amylase -
  ML603_RS02565 (ML603_02565) - 485772..486770 (+) 999 WP_241067473.1 glycosyltransferase -
  ML603_RS02570 (ML603_02570) - 486772..488106 (+) 1335 WP_241067474.1 glycosyltransferase family 4 protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36683.74 Da        Isoelectric Point: 5.7248

>NTDB_id=660920 ML603_RS02555 WP_003049927.1 483077..484078(+) (ccpA) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVSNVVDILAENHQSIAFVSGPLIDDINGKVRLAGYKEGLKHNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=660920 ML603_RS02555 WP_003049927.1 483077..484078(+) (ccpA) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGAATACAGATGATACCATCACGATTTATGACGTTGCCCGTGAAGCTGGTGTTTCTATGGCAACTGTTAGTCGTGTTGT
TAATGGCAACAAAAACGTTAAGGAAAACACGCGTAAGAAAGTTTTAGAAGTCATTGACCGCCTAGATTATCGTCCAAATG
CTGTCGCACGTGGTCTCGCCAGCAAAAAAACAACAACCGTCGGGGTTGTGATTCCGAATATTGCAAACAGTTATTTTTCT
ATTTTAGCCAAAGGTATTGATGATATCGCCGCTATGTATAAATATAATATTGTACTTGCCTCTAGTGATGAGGATGATGA
CAAGGAGGTTAACGTTGTCAATACCCTCTTTGCTAAGCAAGTTGACGGTATTATCTTTATGGGTCACCATTTGACTGAAA
AAATCCGTGCGGAATTTTCACGCTCACGCACCCCGATTGTTTTAGCAGGGACAGTTGACCTTGATCATCAATTACCAAGT
GTTAATATTGACTATAAGGCAGCTGTGTCTAATGTGGTTGATATTTTGGCAGAAAACCATCAGAGCATTGCCTTTGTGTC
AGGACCACTTATTGATGACATCAATGGTAAAGTACGTTTGGCGGGTTACAAAGAAGGCTTGAAGCACAACAAACTTGACT
TCAAAGAAGGACTTGTTTTTGAAGCTAATTATTCTTATAAAGAAGGTTTTGAATTGGCACAACGTGTGATTAACTCCGGA
GCAACAGCAGCTTATGTGGCTGAAGATGAGTTAGCAGCGGGTCTTTTAAATGGTTTGTTTGAAGCAGGCAAACGCGTTCC
AGAAGATTTTGAAATCATCACAAGCAATGATTCACCAGTTGTTCAATATACCCGTCCAAACTTGAGTTCTATCAGCCAAC
CCGTTTACGACTTGGGAGCTGTCAGCATGCGGATGTTGACTAAAATCATGAACAAAGAAGAGTTGGAAGAAAAAGAAATT
CTTTTGAATCATGGTATTAAAAAACGCGGAACCACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.778

100

0.778

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553