Detailed information NTG0660770

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG295_RS22835
• Genome accession: NZ_CP108442
• Coordinates: 5095263..5096549 (+)
• Length: 428 a.a.
• NCBI ID: WP_030229634.1
• Uniprot ID: A0A2K8PJ03
• Organism: Streptomyces sp. NBC_01276
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5090263..5101549

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG295_RS22805 (OG295_22820)	-	5090305..5091480 (+)	1176	WP_371678547.1	tyrosine-type recombinase/integrase	-
OG295_RS22820 (OG295_22835)	tig	5092057..5093445 (+)	1389	WP_266839022.1	trigger factor	-
OG295_RS22825 (OG295_22840)	-	5093737..5094354 (+)	618	WP_030229632.1	ATP-dependent Clp protease proteolytic subunit	-
OG295_RS22830 (OG295_22845)	clpP	5094428..5095108 (+)	681	WP_371678548.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG295_RS22835 (OG295_22850)	clpX	5095263..5096549 (+)	1287	WP_030229634.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG295_RS22840 (OG295_22855)	-	5096622..5097596 (-)	975	WP_371678549.1	hypothetical protein	-
OG295_RS22845 (OG295_22860)	-	5097690..5098316 (-)	627	WP_371678550.1	hypothetical protein	-
OG295_RS22850 (OG295_22865)	-	5098415..5101036 (+)	2622	WP_371678551.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46918.82 Da
• Isoelectric Point: 4.7751

>NTDB_id=660770 OG295_RS22835 WP_030229634.1 5095263..5096549(+) (clpX) [Streptomyces sp. NBC_01276]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=660770 OG295_RS22835 WP_030229634.1 5095263..5096549(+) (clpX) [Streptomyces sp. NBC_01276]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAACTCGCGGAAACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCGGTAGCGGTCTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
TGACGACGCGATCGAACTCGCGAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCCGGCAAGACCCTGCTCGCGCAGA
CGCTCGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGTGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTCTCGGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACGACGGCCTCCGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGCGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTGCCCGTCCTGACCTCGGTGCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTGGTGGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCGGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCCGACGTGGTCCGCTCCAACGTCAACCCGACGCTGGTCCCCCGCATCGTCCCGAAGGACCAGGGCCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A2K8PJ03

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.925	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516