Detailed information NTG0660657

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG723_RS14140
• Genome accession: NZ_CP108439
• Coordinates: 3032015..3033301 (-)
• Length: 428 a.a.
• NCBI ID: WP_030297265.1
• Uniprot ID: A0ABN0VAM4
• Organism: Streptomyces sp. NBC_01278
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3027015..3038301

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG723_RS14130 (OG723_14160)	-	3028207..3030828 (-)	2622	WP_327283421.1	valine--tRNA ligase	-
OG723_RS14135 (OG723_14165)	-	3030958..3031902 (+)	945	WP_327283422.1	hypothetical protein	-
OG723_RS14140 (OG723_14170)	clpX	3032015..3033301 (-)	1287	WP_030297265.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG723_RS14145 (OG723_14175)	clpP	3033455..3034126 (-)	672	WP_323179072.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG723_RS14150 (OG723_14180)	clpP	3034213..3034830 (-)	618	WP_327283423.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG723_RS14155 (OG723_14185)	tig	3035163..3036545 (-)	1383	WP_327283424.1	trigger factor	-
OG723_RS14170 (OG723_14200)	-	3037127..3037638 (+)	512	Protein_2805	replication initiator	-
OG723_RS14175 (OG723_14205)	-	3037631..3037831 (+)	201	WP_329313524.1	excisionase family DNA-binding protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46909.81 Da
• Isoelectric Point: 4.7271

>NTDB_id=660657 OG723_RS14140 WP_030297265.1 3032015..3033301(-) (clpX) [Streptomyces sp. NBC_01278]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLVPRIVPKDQGPQEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=660657 OG723_RS14140 WP_030297265.1 3032015..3033301(-) (clpX) [Streptomyces sp. NBC_01278]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCTCGCGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCGGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
TGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCGACGGGCTCCGGCAAGACGCTGCTCGCCCAAA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCTGACGCGACGGCGCTGACGGAGGCCGGGTACGTGGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGTGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCTTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTGCCCGTCATCACCTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTGGTGGAGCCGCGAAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGACGTCGTCCGCTCGAACGTCAACCCGACGCTGGTCCCGCGCATCGTCCCGAAGGACCAGGGCCCGCAGGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519