Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   MK860_RS15130 Genome accession   NZ_CP092829
Coordinates   2947418..2949703 (-) Length   761 a.a.
NCBI ID   WP_278176354.1    Uniprot ID   -
Organism   Bacillus pumilus strain MS32     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2942418..2954703
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MK860_RS15090 (MK860_15030) - 2942828..2943259 (+) 432 WP_034317176.1 Na(+)/H(+) antiporter subunit B -
  MK860_RS15095 (MK860_15035) - 2943259..2943600 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  MK860_RS15100 (MK860_15040) - 2943593..2945071 (+) 1479 WP_106066316.1 Na+/H+ antiporter subunit D -
  MK860_RS15105 (MK860_15045) - 2945078..2945557 (+) 480 WP_003213059.1 Na+/H+ antiporter subunit E -
  MK860_RS15110 (MK860_15050) - 2945557..2945838 (+) 282 WP_113768029.1 Na(+)/H(+) antiporter subunit F1 -
  MK860_RS15115 (MK860_15055) mnhG 2945822..2946196 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  MK860_RS15120 (MK860_15060) - 2946283..2946672 (-) 390 WP_106066313.1 hotdog fold thioesterase -
  MK860_RS15125 (MK860_15065) comA 2946696..2947337 (-) 642 WP_058013793.1 response regulator transcription factor Regulator
  MK860_RS15130 (MK860_15070) comP 2947418..2949703 (-) 2286 WP_278176354.1 ATP-binding protein Regulator
  MK860_RS15135 (MK860_15075) comX 2949710..2949889 (-) 180 WP_034620107.1 competence pheromone ComX -
  MK860_RS15140 (MK860_15080) - 2949867..2950790 (-) 924 WP_278176358.1 polyprenyl synthetase family protein -
  MK860_RS15145 (MK860_15085) degQ 2950942..2951082 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  MK860_RS15150 (MK860_15090) - 2951588..2951941 (+) 354 WP_185106862.1 inner spore coat protein -
  MK860_RS15155 (MK860_15095) - 2951972..2953198 (-) 1227 WP_106066310.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 761 a.a.        Molecular weight: 87799.98 Da        Isoelectric Point: 7.0802

>NTDB_id=660612 MK860_RS15130 WP_278176354.1 2947418..2949703(-) (comP) [Bacillus pumilus strain MS32]
MQKFYSKLTVILIILSFIYVIYISYINVFNIFVGAVVSVNSDGQLEIEDVVDFTDSYYAGVRKGDIILEVNGNKEPTEEV
RRGYLANVKSLVVDRHGDEIVIENVRLLSQENLFIYLIPIIFYSICLFCIFMILKINKSRKKESAYILALFLLAVAVAYV
SSGGSGKGEYISGFIVISTMTCVPPLYMHFMYQYLKELGTKIISVRVLLSLYAVPFINLVLEIYFKNMVLAAFNLLSFFA
LAFITIIITFRSAKRWKGTEIGNVLSAFGLVLITSFSPFMLFFIIPYFFHKYFISPYILASFALLIPFFLVYQFMSNKLY
NVDFFMGRIKYYCLLAITPTIVVVIIFDFIQKPSANFYTVKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNYQDSVF
KFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKPDGQIEEIDESSGDSELWKKYVDQFQELLGEVGKIVGLDKGF
MMKIGERGGHSFVICGLSNLQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMFAMEEK
QRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDLGLVKAIS
KLTSQIQEEAPFHIRLNTTRFDKELDIDSQLNIYRIVQELLSNALKHSQATQVLVMLICIKDQVVLHYEDDGVGFDASHL
DQHTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2286 bp        

>NTDB_id=660612 MK860_RS15130 WP_278176354.1 2947418..2949703(-) (comP) [Bacillus pumilus strain MS32]
ATGCAAAAATTTTACTCGAAATTAACTGTTATTTTAATCATCCTTAGCTTCATTTATGTGATTTATATTTCCTACATCAA
TGTGTTTAATATCTTTGTAGGAGCAGTCGTTTCGGTGAATAGTGACGGACAACTTGAAATAGAGGATGTTGTTGATTTTA
CAGACAGTTATTATGCTGGTGTTAGAAAAGGCGATATCATCCTTGAAGTGAACGGTAATAAAGAACCAACCGAAGAAGTA
AGAAGAGGTTATTTAGCAAACGTCAAAAGTTTAGTTGTTGATAGACATGGTGATGAAATTGTCATAGAGAATGTGAGGTT
ATTAAGTCAAGAAAATCTATTTATCTACTTAATACCGATCATTTTTTATTCAATCTGTCTATTTTGTATATTTATGATTT
TAAAAATCAACAAATCTAGGAAAAAAGAGTCTGCATATATTCTTGCCCTTTTTTTATTGGCTGTTGCTGTAGCATATGTC
AGTTCTGGTGGTTCTGGTAAAGGTGAGTATATTAGTGGTTTTATCGTCATTTCTACGATGACTTGTGTACCTCCTTTATA
TATGCACTTTATGTATCAGTATTTGAAGGAATTGGGTACGAAAATTATTAGTGTACGTGTGCTTCTTTCTTTGTATGCAG
TTCCATTTATAAATCTTGTTTTAGAAATTTATTTTAAAAATATGGTTTTAGCTGCTTTCAACTTACTTTCGTTTTTTGCA
CTTGCATTTATTACGATTATTATCACATTCAGATCAGCTAAAAGGTGGAAAGGCACGGAAATTGGTAATGTCCTTAGTGC
ATTTGGACTTGTCTTAATCACGTCATTCAGTCCTTTTATGCTGTTCTTTATCATTCCATATTTTTTTCATAAGTATTTTA
TTTCGCCTTATATTCTTGCTTCGTTTGCATTATTAATTCCGTTTTTCTTAGTCTATCAATTTATGTCAAATAAATTGTAT
AATGTGGATTTCTTTATGGGGAGGATCAAATATTACTGCCTTTTAGCCATTACACCAACTATAGTAGTGGTTATCATATT
TGATTTCATTCAAAAACCTAGTGCTAACTTTTATACAGTGAAGTTTACGATTATCACGTATATTCTTATGTTGACAGTCT
TTTACTTTAAAGAAATCATCGATTTTCGCTTTCGCCTGAAGCGTTTTTCAGAGAAGCATAATTATCAGGACAGTGTGTTT
AAATTTACGCAGCTCATTCGCGAGGCATCATCACTTCACCAAGTGTTATATCATTTGAAATACACCATTTTAGAAGTGCT
AGTTGTTAATAAAGCCTTTGTGCTTGAAGTGAAGCCAGATGGACAAATAGAAGAGATTGATGAATCTTCAGGTGATAGTG
AGCTATGGAAAAAGTATGTAGACCAATTTCAAGAATTATTAGGTGAAGTTGGAAAAATCGTCGGGCTTGATAAAGGGTTC
ATGATGAAAATTGGCGAGCGGGGCGGTCACTCGTTTGTGATATGCGGTTTATCCAATTTACAGACACCTAAATTGACGCG
TGATGAGATTTCTTGGCTGAAAACATTGGCATTTTATACAAGTGTCAGTTTAGAAAATGTCGTCAAGATTGAAGAATTGA
TGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAACCCTGCTTGGCTGAAAAAAGTCATGTTTGCGATGGAAGAAAAG
CAGCGATCAGATTTAGCAAGAGATCTTCATGATTCTGTGCTGCAGGATTTGATATCACTGAAAAGGCAGTCAGAGATGTT
TTTAACGAATTTCCAAAATGACCAATGCCCGACTTCTATTGAACAATCGCTTATCTCATGGAATGAGCAAATGTCTAAAG
TGATTCAAACGACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTACTGTATGATTTAGGTTTAGTGAAGGCGATATCG
AAGCTGACTTCTCAAATCCAGGAGGAAGCACCGTTTCATATCCGGCTGAATACGACACGTTTTGATAAAGAGCTGGACAT
TGATTCCCAGCTGAATATTTACCGGATTGTTCAAGAACTGTTATCCAATGCATTGAAACACTCTCAAGCGACCCAAGTGC
TGGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGATGATGGAGTAGGCTTTGACGCAAGCCATCTT
GATCAGCACACCATGAGCATGGGCCTCTCTGGGATCAGAGAACGAGTCAAGGCGTTAAATGGGAAGCTTCATATTCATAC
AGCACCTGAAAAAGGGTTGAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.098

100

0.501