Detailed information NTG0660258

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG730_RS27565
• Genome accession: NZ_CP108414
• Coordinates: 6069986..6071272 (+)
• Length: 428 a.a.
• NCBI ID: WP_250739478.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01298
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6064986..6076272

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG730_RS27530 (OG730_27510)	-	6065564..6065758 (+)	195	WP_327306755.1	hypothetical protein	-
OG730_RS27535 (OG730_27515)	-	6065856..6066101 (-)	246	WP_327306756.1	hypothetical protein	-
OG730_RS27550 (OG730_27530)	tig	6066741..6068135 (+)	1395	WP_327306757.1	trigger factor	-
OG730_RS27555 (OG730_27535)	-	6068457..6069074 (+)	618	WP_250739480.1	ATP-dependent Clp protease proteolytic subunit	-
OG730_RS27560 (OG730_27540)	clpP	6069182..6069832 (+)	651	WP_243334852.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG730_RS27565 (OG730_27545)	clpX	6069986..6071272 (+)	1287	WP_250739478.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG730_RS27570 (OG730_27550)	-	6071776..6072741 (-)	966	WP_327306758.1	hypothetical protein	-
OG730_RS27575 (OG730_27555)	-	6072869..6075490 (+)	2622	WP_327306759.1	valine--tRNA ligase	-
OG730_RS27580 (OG730_27560)	-	6075605..6076186 (-)	582	WP_327306760.1	vitamin K epoxide reductase family protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46950.82 Da
• Isoelectric Point: 4.8219

>NTDB_id=660258 OG730_RS27565 WP_250739478.1 6069986..6071272(+) (clpX) [Streptomyces sp. NBC_01298]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASNQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SDVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=660258 OG730_RS27565 WP_250739478.1 6069986..6071272(+) (clpX) [Streptomyces sp. NBC_01298]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAGCTGGCCGAGACTT
CCGAGGTCAGGTGGGAGGAACTCCCCAAGCCTCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGGACGGGCCG
TGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACGCTGCTGGCCCAGA
CGCTGGCCCGGATGCTCAACGTTCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAAACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TCCTGAAGATCCTGGAAGGCACGACCGCTTCCGTACCGCCGCAGGGCGGTCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGGCTGGAGCGGATCATCGAATCCCGTGCCGGCGC
GAAGGGCATCGGCTTCGGGGCGACCATCCGCTCGAAGCGCGAGATCGAGGCGAGCAACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
TCGGACGTGGTCCGTTCCAACGTCAACCCGACGCTGGTCCCGCGGATCGTCCCGAAGGACCAGGGGCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519