Detailed information NTG0660170

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG622_RS32925
• Genome accession: NZ_CP108394
• Coordinates: 7459394..7460680 (+)
• Length: 428 a.a.
• NCBI ID: WP_371580262.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01314
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7454394..7465680

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG622_RS32890 (OG622_32990)	-	7454422..7454889 (-)	468	WP_371580260.1	DUF6083 domain-containing protein	-
OG622_RS32910 (OG622_33010)	tig	7455929..7457329 (+)	1401	WP_371580261.1	trigger factor	-
OG622_RS32915 (OG622_33015)	clpP	7457759..7458367 (+)	609	WP_046703654.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG622_RS32920 (OG622_33020)	clpP	7458510..7459190 (+)	681	WP_037703089.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG622_RS32925 (OG622_33025)	clpX	7459394..7460680 (+)	1287	WP_371580262.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG622_RS32930 (OG622_33030)	-	7460892..7461176 (+)	285	WP_371580263.1	hypothetical protein	-
OG622_RS32935 (OG622_33035)	-	7461324..7462271 (-)	948	WP_371580264.1	hypothetical protein	-
OG622_RS32940 (OG622_33040)	-	7462409..7465066 (+)	2658	WP_371580265.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46919.76 Da
• Isoelectric Point: 4.8317

>NTDB_id=660170 OG622_RS32925 WP_371580262.1 7459394..7460680(+) (clpX) [Streptomyces sp. NBC_01314]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENSGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SDVVRSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=660170 OG622_RS32925 WP_371580262.1 7459394..7460680(+) (clpX) [Streptomyces sp. NBC_01314]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAACTCGCTGAGACCA
GCGAGGTCCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTATGTGGTGGGCCAGGAGGCG
GCCAAGAAGGCGCTTTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACAGCGGCGGTCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCCTTCGCGATCGCGGACGCGACGGCGCTGACGGAGGCGGGTTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
TGAGATCGACAAGGTCGCGAGGAAGAGTGAAAACCCCTCCATCACCCGCGACGTGTCGGGTGAGGGCGTACAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACCACGGCGTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCCGGTCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGCTGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTGCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGTTGCTCCAGATCCTCATCGAGCCCCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCGTTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGTCTGC
GCGCCATCATGGAAGAAGTCCTGATGTCGGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGAGTCGTCATCACC
TCGGACGTCGTCCGCTCGAACGTGAACCCGACCCTGATCCCGCGGGACGCCCGCGGCCGGGGCCCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.925	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523