Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Regulator |
| Locus tag | SMUNUM_RS08935 | Genome accession | NZ_AP014571 |
| Coordinates | 1808910..1809923 (-) | Length | 337 a.a. |
| NCBI ID | WP_002296717.1 | Uniprot ID | - |
| Organism | Streptococcus mutans LP13 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1803910..1814923
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMUNUM_RS08895 (SMNUM_1688) | - | 1804415..1804819 (+) | 405 | WP_002263912.1 | hypothetical protein | - |
| SMUNUM_RS08900 | - | 1804942..1805154 (-) | 213 | Protein_1707 | IS3 family transposase | - |
| SMUNUM_RS08905 (SMNUM_1690) | - | 1805594..1805758 (+) | 165 | WP_002265308.1 | hypothetical protein | - |
| SMUNUM_RS08910 (SMNUM_1691) | - | 1806142..1806354 (+) | 213 | WP_002263744.1 | Blp family class II bacteriocin | - |
| SMUNUM_RS08915 (SMNUM_1692) | - | 1806518..1806706 (+) | 189 | WP_002263743.1 | Blp family class II bacteriocin | - |
| SMUNUM_RS08920 (SMNUM_1693) | - | 1807192..1808214 (+) | 1023 | WP_002263742.1 | thioredoxin family protein | - |
| SMUNUM_RS08925 (SMNUM_1694) | - | 1808287..1808439 (+) | 153 | WP_002263741.1 | hypothetical protein | - |
| SMUNUM_RS08930 (SMNUM_1695) | - | 1808506..1808649 (+) | 144 | WP_002263740.1 | hypothetical protein | - |
| SMUNUM_RS08935 (SMNUM_1696) | comB | 1808910..1809923 (-) | 1014 | WP_002296717.1 | HlyD family efflux transporter periplasmic adaptor subunit | Regulator |
| SMUNUM_RS08940 (SMNUM_1697) | - | 1809936..1810482 (-) | 547 | Protein_1715 | ATP-binding cassette domain-containing protein | - |
| SMUNUM_RS08945 (SMNUM_1698) | - | 1811396..1811797 (-) | 402 | WP_002310604.1 | hypothetical protein | - |
| SMUNUM_RS08950 (SMNUM_1699) | cipB | 1811928..1812158 (-) | 231 | WP_002265368.1 | Blp family class II bacteriocin | Regulator |
| SMUNUM_RS08955 (SMNUM_1700) | comC/blpC | 1812423..1812563 (+) | 141 | WP_002270250.1 | ComC/BlpC family leader-containing pheromone/bacteriocin | Regulator |
| SMUNUM_RS08960 (SMNUM_1701) | comD/blpH | 1812705..1814030 (-) | 1326 | WP_002267940.1 | GHKL domain-containing protein | Regulator |
| SMUNUM_RS08965 (SMNUM_1702) | comE/blpR | 1814027..1814779 (-) | 753 | WP_002270252.1 | response regulator transcription factor | Regulator |
Sequence
Protein
Download Length: 337 a.a. Molecular weight: 38528.16 Da Isoelectric Point: 10.7202
>NTDB_id=65996 SMUNUM_RS08935 WP_002296717.1 1808910..1809923(-) (comB) [Streptococcus mutans LP13]
MNPNLFKSAEFYRRRYHNFATVLIIPLVCLLVFLFIFLLFAKKEVTVLSDGEISPIKVIDVIQSKSDYPISENNLTDNHT
VKKRDVLIQYVNPAANTRQGGNNQNQNQSQNKQNKNQQQNNKNQKNGNQGQKNQNQNQNKKDQKNNNQSQQNKQGQKKTN
QSQNQQNKNQNKNQSQNKQNGNQNQNNWNQNNQNDKVTASQDGVIHTNPKYEGENLIPRGTEIAQLYPDINKTRQVLITY
YVSSKDVTRLKQGQKTHLALTKVGNDQISIRGKINSIASAATTTKKGNVFKVTAKAKVSKKDSQTIKYGLQGKTITVVEK
KTFFDYYKDKLLNKNQK
MNPNLFKSAEFYRRRYHNFATVLIIPLVCLLVFLFIFLLFAKKEVTVLSDGEISPIKVIDVIQSKSDYPISENNLTDNHT
VKKRDVLIQYVNPAANTRQGGNNQNQNQSQNKQNKNQQQNNKNQKNGNQGQKNQNQNQNKKDQKNNNQSQQNKQGQKKTN
QSQNQQNKNQNKNQSQNKQNGNQNQNNWNQNNQNDKVTASQDGVIHTNPKYEGENLIPRGTEIAQLYPDINKTRQVLITY
YVSSKDVTRLKQGQKTHLALTKVGNDQISIRGKINSIASAATTTKKGNVFKVTAKAKVSKKDSQTIKYGLQGKTITVVEK
KTFFDYYKDKLLNKNQK
Nucleotide
Download Length: 1014 bp
>NTDB_id=65996 SMUNUM_RS08935 WP_002296717.1 1808910..1809923(-) (comB) [Streptococcus mutans LP13]
ATGAACCCAAATTTATTTAAAAGCGCTGAATTCTACCGAAGACGCTATCATAATTTTGCTACAGTTCTTATTATTCCTTT
GGTTTGTTTACTTGTATTTTTATTTATCTTTCTATTATTTGCTAAAAAAGAGGTCACTGTCTTGTCTGATGGCGAGATCT
CTCCCATTAAAGTAATTGATGTTATTCAATCTAAAAGTGATTATCCCATTTCTGAAAATAATTTAACAGATAATCACACC
GTTAAAAAAAGGGATGTTCTCATCCAATATGTTAATCCAGCAGCAAATACAAGACAGGGCGGAAATAATCAGAATCAAAA
TCAATCTCAAAACAAGCAAAATAAGAATCAGCAGCAAAACAATAAGAATCAAAAAAACGGCAATCAAGGTCAAAAAAATC
AAAATCAGAACCAAAATAAAAAGGATCAGAAAAACAATAACCAATCTCAGCAAAACAAGCAAGGACAAAAGAAAACTAAT
CAATCCCAAAATCAGCAGAATAAGAATCAAAATAAAAACCAATCTCAAAACAAACAAAATGGGAATCAAAACCAAAATAA
CTGGAATCAGAATAATCAAAATGATAAAGTCACAGCCAGCCAAGATGGTGTTATCCATACCAACCCCAAATATGAAGGTG
AAAACTTAATTCCTCGGGGGACTGAAATCGCACAGCTCTATCCAGATATTAACAAAACAAGACAAGTTCTGATCACTTAT
TACGTCTCCTCTAAAGATGTCACCCGCCTCAAACAAGGCCAAAAGACTCATCTTGCTTTAACCAAGGTAGGAAATGATCA
AATTTCCATTAGAGGAAAAATTAATAGTATCGCTTCAGCTGCTACAACGACGAAAAAAGGCAATGTTTTTAAAGTGACAG
CTAAAGCAAAAGTTTCTAAAAAAGACAGCCAAACCATTAAATACGGCCTCCAGGGTAAAACCATCACAGTTGTTGAAAAA
AAGACTTTCTTTGATTATTATAAAGATAAACTGTTAAATAAAAATCAAAAATAA
ATGAACCCAAATTTATTTAAAAGCGCTGAATTCTACCGAAGACGCTATCATAATTTTGCTACAGTTCTTATTATTCCTTT
GGTTTGTTTACTTGTATTTTTATTTATCTTTCTATTATTTGCTAAAAAAGAGGTCACTGTCTTGTCTGATGGCGAGATCT
CTCCCATTAAAGTAATTGATGTTATTCAATCTAAAAGTGATTATCCCATTTCTGAAAATAATTTAACAGATAATCACACC
GTTAAAAAAAGGGATGTTCTCATCCAATATGTTAATCCAGCAGCAAATACAAGACAGGGCGGAAATAATCAGAATCAAAA
TCAATCTCAAAACAAGCAAAATAAGAATCAGCAGCAAAACAATAAGAATCAAAAAAACGGCAATCAAGGTCAAAAAAATC
AAAATCAGAACCAAAATAAAAAGGATCAGAAAAACAATAACCAATCTCAGCAAAACAAGCAAGGACAAAAGAAAACTAAT
CAATCCCAAAATCAGCAGAATAAGAATCAAAATAAAAACCAATCTCAAAACAAACAAAATGGGAATCAAAACCAAAATAA
CTGGAATCAGAATAATCAAAATGATAAAGTCACAGCCAGCCAAGATGGTGTTATCCATACCAACCCCAAATATGAAGGTG
AAAACTTAATTCCTCGGGGGACTGAAATCGCACAGCTCTATCCAGATATTAACAAAACAAGACAAGTTCTGATCACTTAT
TACGTCTCCTCTAAAGATGTCACCCGCCTCAAACAAGGCCAAAAGACTCATCTTGCTTTAACCAAGGTAGGAAATGATCA
AATTTCCATTAGAGGAAAAATTAATAGTATCGCTTCAGCTGCTACAACGACGAAAAAAGGCAATGTTTTTAAAGTGACAG
CTAAAGCAAAAGTTTCTAAAAAAGACAGCCAAACCATTAAATACGGCCTCCAGGGTAAAACCATCACAGTTGTTGAAAAA
AAGACTTTCTTTGATTATTATAAAGATAAACTGTTAAATAAAAATCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Streptococcus mutans UA159 |
99.703 |
100 |
0.997 |
| comB/nlmE | Streptococcus mutans UA159 |
50 |
99.11 |
0.496 |