Detailed information NTG0659934

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG395_RS34130
• Genome accession: NZ_CP108390
• Coordinates: 7506842..7508140 (+)
• Length: 432 a.a.
• NCBI ID: WP_030921263.1
• Uniprot ID: A0ABV2UFH0
• Organism: Streptomyces sp. NBC_01320
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7501842..7513140

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG395_RS34100 (OG395_34070)	-	7502892..7503086 (+)	195	WP_037698756.1	hypothetical protein	-
OG395_RS34115 (OG395_34085)	tig	7503641..7505035 (+)	1395	WP_327246356.1	trigger factor	-
OG395_RS34120 (OG395_34090)	-	7505334..7505939 (+)	606	WP_327249541.1	ATP-dependent Clp protease proteolytic subunit	-
OG395_RS34125 (OG395_34095)	clpP	7505992..7506684 (+)	693	WP_266985683.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG395_RS34130 (OG395_34100)	clpX	7506842..7508140 (+)	1299	WP_030921263.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG395_RS34135 (OG395_34105)	-	7508217..7509221 (-)	1005	WP_327246357.1	hypothetical protein	-
OG395_RS34140 (OG395_34110)	-	7509362..7511983 (+)	2622	WP_327246358.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47270.09 Da
• Isoelectric Point: 4.8824

>NTDB_id=659934 OG395_RS34130 WP_030921263.1 7506842..7508140(+) (clpX) [Streptomyces sp. NBC_01320]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=659934 OG395_RS34130 WP_030921263.1 7506842..7508140(+) (clpX) [Streptomyces sp. NBC_01320]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGCGCAGGGCCG
CGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCAGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGTCTGGAGCGGATCATCGAATCGCGGGCGGGCGC
CAAGGGCATCGGCTTCGGTGCAACGATCCGTTCCAAGCGCGAGATCGAGGCAAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGATGGTGT
GGAGCTGGACTTCGACCGTCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGTCTGC
GCGCCATCATGGAAGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGCCG
CCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509