Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   SMUNUM_RS07375 Genome accession   NZ_AP014571
Coordinates   1526640..1527641 (-) Length   333 a.a.
NCBI ID   WP_019805473.1    Uniprot ID   -
Organism   Streptococcus mutans LP13     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1521640..1532641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNUM_RS07350 (SMNUM_1410) - 1521676..1522317 (-) 642 WP_002266171.1 hypothetical protein -
  SMUNUM_RS07355 - 1522311..1522509 (-) 199 Protein_1421 hypothetical protein -
  SMUNUM_RS07360 (SMNUM_1411) - 1522588..1523922 (-) 1335 WP_002264974.1 glycosyltransferase family 4 protein -
  SMUNUM_RS07365 (SMNUM_1412) - 1523924..1524922 (-) 999 WP_002278505.1 glycosyltransferase -
  SMUNUM_RS07370 (SMNUM_1413) - 1525032..1526492 (-) 1461 WP_002278111.1 alpha-amylase -
  SMUNUM_RS07375 (SMNUM_1414) ccpA 1526640..1527641 (-) 1002 WP_019805473.1 catabolite control protein A Regulator
  SMUNUM_RS07380 (SMNUM_1415) - 1527804..1528883 (+) 1080 WP_025989504.1 Xaa-Pro peptidase family protein -
  SMUNUM_RS07385 (SMNUM_1416) - 1528998..1529579 (-) 582 WP_002282619.1 CDP-archaeol synthase -
  SMUNUM_RS07390 (SMNUM_1417) - 1529706..1530476 (-) 771 WP_019805475.1 carbonic anhydrase family protein -
  SMUNUM_RS07395 (SMNUM_1418) celB 1530741..1532099 (-) 1359 WP_002262793.1 PTS cellobiose transporter subunit IIC -
  SMUNUM_RS07400 (SMNUM_1419) - 1532115..1532633 (-) 519 WP_002262792.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36650.93 Da        Isoelectric Point: 6.6213

>NTDB_id=65987 SMUNUM_RS07375 WP_019805473.1 1526640..1527641(-) (ccpA) [Streptococcus mutans LP13]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPFIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVAEDELAAGLLNGLFAAGMKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=65987 SMUNUM_RS07375 WP_019805473.1 1526640..1527641(-) (ccpA) [Streptococcus mutans LP13]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAACATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAGT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCTTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTGCTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTATGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGACTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

75.676

100

0.757

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553


Multiple sequence alignment