Detailed information NTG0659840

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG772_RS24315
• Genome accession: NZ_CP108388
• Coordinates: 5270694..5271992 (+)
• Length: 432 a.a.
• NCBI ID: WP_266746184.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01321
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5265694..5276992

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG772_RS24285 (OG772_24295)	-	5266671..5266865 (+)	195	WP_266746187.1	hypothetical protein	-
OG772_RS24300 (OG772_24310)	tig	5267478..5268902 (+)	1425	WP_327349866.1	trigger factor	-
OG772_RS24305 (OG772_24315)	clpP	5269166..5269774 (+)	609	WP_266752174.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG772_RS24310 (OG772_24320)	clpP	5269856..5270536 (+)	681	WP_323183850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG772_RS24315 (OG772_24325)	clpX	5270694..5271992 (+)	1299	WP_266746184.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG772_RS24320 (OG772_24330)	-	5272073..5273071 (-)	999	WP_327350202.1	hypothetical protein	-
OG772_RS24325 (OG772_24335)	-	5273225..5275873 (+)	2649	WP_266906744.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47303.07 Da
• Isoelectric Point: 4.8306

>NTDB_id=659840 OG772_RS24315 WP_266746184.1 5270694..5271992(+) (clpX) [Streptomyces sp. NBC_01321]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENSGAQGRDDGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=659840 OG772_RS24315 WP_266746184.1 5270694..5271992(+) (clpX) [Streptomyces sp. NBC_01321]
GTGGCACGCATCGGTGATGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAACTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACAGCGGCGCCCAGGGCCG
GGACGACGGCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTTCTCGCGCAGA
CCCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGTGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAATCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAATGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGTCTGGAGCGAATTATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGTTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCCTCACCTCGGTCCACAACCTGGACCGC
GAGGCACTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTATCAACGCCTGTTCGAACTCGACGGCGT
CGAGCTGGACTTCGACCGTCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGCCTGC
GGGCCATCATGGAAGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTCGTCCGCAACAACGTGAACCCGACGCTGGTCCCGCGCGAACCGCGCACGATCGGCAAGGGCGACGACGGCCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509