Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SMUNUM_RS07030 Genome accession   NZ_AP014571
Coordinates   1453047..1453850 (-) Length   267 a.a.
NCBI ID   WP_002264820.1    Uniprot ID   -
Organism   Streptococcus mutans LP13     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1448047..1458850
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNUM_RS07020 (SMNUM_1343) smc 1448709..1452245 (-) 3537 WP_019805461.1 chromosome segregation protein SMC -
  SMUNUM_RS07025 (SMNUM_1344) rnc 1452245..1452940 (-) 696 WP_002266141.1 ribonuclease III -
  SMUNUM_RS07030 (SMNUM_1345) vicX 1453047..1453850 (-) 804 WP_002264820.1 MBL fold metallo-hydrolase Regulator
  SMUNUM_RS07035 (SMNUM_1346) vicK 1453847..1455199 (-) 1353 WP_002264821.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SMUNUM_RS07040 (SMNUM_1347) vicR 1455192..1455899 (-) 708 WP_002262930.1 response regulator YycF Regulator
  SMUNUM_RS07045 (SMNUM_1348) - 1456252..1457034 (+) 783 WP_002266943.1 amino acid ABC transporter ATP-binding protein -
  SMUNUM_RS07050 (SMNUM_1349) - 1457031..1457843 (+) 813 WP_019805462.1 transporter substrate-binding domain-containing protein -
  SMUNUM_RS07055 (SMNUM_1350) - 1457861..1458565 (+) 705 WP_002264823.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29681.71 Da        Isoelectric Point: 6.1184

>NTDB_id=65982 SMUNUM_RS07030 WP_002264820.1 1453047..1453850(-) (vicX) [Streptococcus mutans LP13]
MTETGFRYSILASGSSGNSFYLETPQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVGVLARKYGLD
VYANAATWQAMDGMIGKIDVSQKHIFDLGKTITFGDIDIESFGVSHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLI
ENADGYLIESNHDIEILRSGTYPWSLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKENNVKELAHMTMKNAL
MQADLAVDHDFKIYDTSPDTALPLAKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=65982 SMUNUM_RS07030 WP_002264820.1 1453047..1453850(-) (vicX) [Streptococcus mutans LP13]
ATGACAGAAACAGGTTTTAGATACAGCATTCTGGCTTCTGGTTCAAGTGGCAATAGTTTTTATTTGGAAACTCCTCAAAA
GAGAATTTTAATTGACGCAGGCCTCTCAGGTAAGAAAATTAGTCAATTAATGGCAGAAATAGACCGAAAAGTAGATGATG
TTGATGCCATTTTAGTAACACATGAACATAAAGATCATATTCACGGTGTTGGTGTACTAGCTCGGAAATATGGTTTGGAT
GTCTATGCGAATGCAGCAACATGGCAAGCTATGGATGGCATGATTGGTAAAATTGATGTCAGCCAAAAACATATCTTTGA
TCTGGGGAAAACCATCACTTTTGGGGATATTGATATTGAAAGTTTTGGTGTCAGCCATGATGCTGCTCAACCACAGTTTT
ACCGCCTGATGAAAGACGGCAAGAGTTTTGTCATATTGACGGATACAGGTTATGTCAGTGATCGTATGGCAGATCTGATT
GAAAATGCTGATGGTTATCTGATTGAGTCCAATCATGATATTGAAATTTTACGCTCAGGTACCTACCCTTGGAGTTTAAA
ACAGCGTATTTTATCCGATAAAGGACACCTATCAAATGATGATGGTGCAGAAACAATGGTTCGAACTTTGGGGAATAAAA
CAAAAAAGATTTATTTGGGACATCTCAGCAAAGAAAACAATGTCAAAGAATTAGCCCATATGACGATGAAGAATGCTCTC
ATGCAGGCAGATTTGGCTGTAGATCATGATTTTAAGATTTATGATACCTCGCCAGATACTGCTTTACCATTAGCAAAAAT
CTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

99.625

100

0.996

Multiple sequence alignment