Detailed information NTG0659738

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG384_RS11235
• Genome accession: NZ_CP108385
• Coordinates: 2474490..2475788 (-)
• Length: 432 a.a.
• NCBI ID: WP_327336834.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01324
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2469490..2480788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG384_RS11225 (OG384_11230)	-	2470647..2473268 (-)	2622	WP_327336832.1	valine--tRNA ligase	-
OG384_RS11230 (OG384_11235)	-	2473419..2474414 (+)	996	WP_327336833.1	hypothetical protein	-
OG384_RS11235 (OG384_11240)	clpX	2474490..2475788 (-)	1299	WP_327336834.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG384_RS11240 (OG384_11245)	clpP	2475946..2476629 (-)	684	WP_024492986.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG384_RS11245 (OG384_11250)	-	2476705..2477310 (-)	606	WP_164494417.1	ATP-dependent Clp protease proteolytic subunit	-
OG384_RS11250 (OG384_11255)	tig	2477575..2478972 (-)	1398	WP_327336835.1	trigger factor	-
OG384_RS11265 (OG384_11270)	-	2479502..2480647 (-)	1146	WP_327336836.1	tyrosine-type recombinase/integrase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47362.18 Da
• Isoelectric Point: 4.7809

>NTDB_id=659738 OG384_RS11235 WP_327336834.1 2474490..2475788(-) (clpX) [Streptomyces sp. NBC_01324]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGASRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=659738 OG384_RS11235 WP_327336834.1 2474490..2475788(-) (clpX) [Streptomyces sp. NBC_01324]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGCCAGGAGCCC
GCGAAGAAGGCTCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGGGGCGAGCCG
TGACGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCGCAGA
CACTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAACTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCACACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGTCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCGGACCAGGCGATCCTGCGCCAGACCGGCGCCCGAGGCCTGC
GCGCGATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCTGACGTGGTCCGCAACAACGTCAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGGAAGAACGACGACGGCAG
GCACGAGAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.268	93.287	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509