Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   MKS87_RS20095 Genome accession   NZ_CP092631
Coordinates   3863765..3863884 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain YB-15     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3858765..3868884
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKS87_RS20075 (MKS87_20075) albG 3858929..3859630 (+) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  MKS87_RS20080 (MKS87_20080) ywhL 3859636..3861012 (-) 1377 WP_197196294.1 YncE family protein -
  MKS87_RS20085 (MKS87_20085) ywhK 3861051..3862406 (-) 1356 WP_197196295.1 YncE family protein -
  MKS87_RS22070 - 3862403..3862633 (-) 231 WP_015714889.1 hypothetical protein -
  MKS87_RS20090 (MKS87_20090) rapF 3862636..3863781 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  MKS87_RS20095 (MKS87_20095) phrF 3863765..3863884 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  MKS87_RS20100 (MKS87_20100) - 3864137..3864616 (+) 480 WP_015714892.1 hypothetical protein -
  MKS87_RS20105 (MKS87_20105) - 3864765..3865553 (+) 789 WP_015714893.1 membrane protein -
  MKS87_RS20110 (MKS87_20110) - 3865540..3866214 (+) 675 WP_015714894.1 hypothetical protein -
  MKS87_RS20115 (MKS87_20115) - 3866224..3867021 (+) 798 WP_231573542.1 hypothetical protein -
  MKS87_RS20120 (MKS87_20120) - 3867024..3867671 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  MKS87_RS20125 (MKS87_20125) - 3867664..3868224 (+) 561 WP_015714897.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=659393 MKS87_RS20095 WP_009968329.1 3863765..3863884(+) (phrF) [Bacillus subtilis strain YB-15]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=659393 MKS87_RS20095 WP_009968329.1 3863765..3863884(+) (phrF) [Bacillus subtilis strain YB-15]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487