Detailed information NTG0659384

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG311_RS13870
• Genome accession: NZ_CP108362
• Coordinates: 3055128..3056414 (-)
• Length: 428 a.a.
• NCBI ID: WP_030159377.1
• Uniprot ID: A0A5J6JHR3
• Organism: Streptomyces sp. NBC_01343
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3050128..3061414

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG311_RS13860 (OG311_13895)	-	3051171..3053819 (-)	2649	WP_327132058.1	valine--tRNA ligase	-
OG311_RS13865 (OG311_13900)	-	3053948..3054889 (+)	942	WP_327132059.1	hypothetical protein	-
OG311_RS13870 (OG311_13905)	clpX	3055128..3056414 (-)	1287	WP_030159377.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG311_RS13875 (OG311_13910)	clpP	3056568..3057239 (-)	672	WP_030862325.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG311_RS13880 (OG311_13915)	-	3057326..3057943 (-)	618	WP_030862323.1	ATP-dependent Clp protease proteolytic subunit	-
OG311_RS13885 (OG311_13920)	tig	3058230..3059627 (-)	1398	WP_229339717.1	trigger factor	-
OG311_RS13900 (OG311_13935)	-	3060178..3061164 (-)	987	WP_327132060.1	site-specific integrase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46925.81 Da
• Isoelectric Point: 4.7271

>NTDB_id=659384 OG311_RS13870 WP_030159377.1 3055128..3056414(-) (clpX) [Streptomyces sp. NBC_01343]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SDVVRSNVNPTLVPRIVPKDQGPQEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=659384 OG311_RS13870 WP_030159377.1 3055128..3056414(-) (clpX) [Streptomyces sp. NBC_01343]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCTCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCCCTCTCGGTGGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGTGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCGACGGGCTCCGGCAAGACGCTGCTGGCCCAGA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTGGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCGTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTGCCCGTCATCACCTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTGGTGGAGCCGCGGAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCGGACCAAGCGATCCTGCGCCAGACGGGCGCGCGAGGGCTGC
GCGCCATCATGGAAGAGGTCCTCATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
TCGGACGTCGTCCGCTCGAACGTGAACCCGACGCTGGTCCCCCGCATCGTCCCGAAGGACCAGGGCCCGCAGGAGAAGTC
GGCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A5J6JHR3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519