Detailed information NTG0659335

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG625_RS25770
• Genome accession: NZ_CP108356
• Coordinates: 5601958..5603244 (+)
• Length: 428 a.a.
• NCBI ID: WP_326590751.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01351
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5596958..5608244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG625_RS25735 (OG625_25770)	-	5597166..5597360 (+)	195	WP_150519620.1	hypothetical protein	-
OG625_RS25740 (OG625_25775)	-	5597484..5597945 (-)	462	WP_329385579.1	hypothetical protein	-
OG625_RS25755 (OG625_25790)	tig	5598757..5600142 (+)	1386	WP_329385582.1	trigger factor	-
OG625_RS25760 (OG625_25795)	-	5600448..5601065 (+)	618	WP_329385585.1	ATP-dependent Clp protease proteolytic subunit	-
OG625_RS25765 (OG625_25800)	clpP	5601141..5601794 (+)	654	WP_329385588.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG625_RS25770 (OG625_25805)	clpX	5601958..5603244 (+)	1287	WP_326590751.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG625_RS25775 (OG625_25810)	-	5603312..5604226 (-)	915	WP_329385594.1	hypothetical protein	-
OG625_RS25780 (OG625_25815)	-	5604360..5604998 (-)	639	WP_329385596.1	hypothetical protein	-
OG625_RS25785 (OG625_25820)	-	5605097..5607718 (+)	2622	WP_329385599.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46957.85 Da
• Isoelectric Point: 4.8265

>NTDB_id=659335 OG625_RS25770 WP_326590751.1 5601958..5603244(+) (clpX) [Streptomyces sp. NBC_01351]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFHEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SDVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=659335 OG625_RS25770 WP_326590751.1 5601958..5603244(+) (clpX) [Streptomyces sp. NBC_01351]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAGCTCGCGGAGACTT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTGGCCCAGA
CGCTCGCCCGCATGCTGAACGTACCGTTCGCCATCGCCGACGCGACCGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCTCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTGAGCGGCGAGGGCGTGCAGCAGGCGC
TCCTGAAGATCCTGGAAGGCACGACCGCTTCCGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCGTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCACGAGGTCATGCCGG
AGGACTTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCCGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
TCGGACGTGGTCCGCTCCAACGTCAACCCGACGCTGGTCCCGCGGATCGTCCCGAAGGACCAGGGGCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516