Detailed information NTG0659047

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG548_RS29155
• Genome accession: NZ_CP108350
• Coordinates: 6568543..6569829 (+)
• Length: 428 a.a.
• NCBI ID: WP_266827426.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01356
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6563543..6574829

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG548_RS29125 (OG548_29115)	-	6564291..6564485 (+)	195	WP_266462266.1	hypothetical protein	-
OG548_RS29140 (OG548_29130)	tig	6565155..6566540 (+)	1386	WP_329547601.1	trigger factor	-
OG548_RS29145 (OG548_29135)	clpP	6566979..6567584 (+)	606	WP_186001018.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG548_RS29150 (OG548_29140)	clpP	6567702..6568382 (+)	681	WP_266827428.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG548_RS29155 (OG548_29145)	clpX	6568543..6569829 (+)	1287	WP_266827426.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG548_RS29160 (OG548_29150)	-	6569897..6570874 (-)	978	WP_329547602.1	hypothetical protein	-
OG548_RS29165 (OG548_29155)	-	6571011..6573635 (+)	2625	WP_329547603.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46910.75 Da
• Isoelectric Point: 4.7838

>NTDB_id=659047 OG548_RS29155 WP_266827426.1 6568543..6569829(+) (clpX) [Streptomyces sp. NBC_01356]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENSTGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKREIEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFESEALEAIADQAILRKTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=659047 OG548_RS29155 WP_266827426.1 6568543..6569829(+) (clpX) [Streptomyces sp. NBC_01356]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGCCAGGAGCCG
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACAGCACGGGTCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTCCTCGGCCCGACGGGTTCCGGCAAGACCCTTCTCGCGCAGA
CCCTGGCCCGCATGCTGAACGTTCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGTTACGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTCATCCAGGCAGCGGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGCGAGAACCCCTCGATCACCCGCGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGATCGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTCCTCCAGATCCTCGTCGAGCCCCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGAGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCAAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
GCGGACGTCGTCCACTCGAACGTGAACCCGACGCTGATCCCGCGGGACGCGCGGGGCCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.531	94.159	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523