Detailed information NTG0658764

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA58_RS23790
• Genome accession: NZ_CP108312
• Coordinates: 5275080..5276366 (+)
• Length: 428 a.a.
• NCBI ID: WP_116512991.1
• Uniprot ID: A0ABV4SEI4
• Organism: Streptomyces sp. NBC_00009
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5270080..5281366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA58_RS23760 (OHA58_23785)	-	5271191..5271385 (+)	195	WP_100594330.1	hypothetical protein	-
OHA58_RS23775 (OHA58_23800)	tig	5271924..5273318 (+)	1395	WP_389531966.1	trigger factor	-
OHA58_RS23780 (OHA58_23805)	clpP	5273603..5274211 (+)	609	WP_356278867.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA58_RS23785 (OHA58_23810)	clpP	5274265..5274924 (+)	660	WP_227294656.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA58_RS23790 (OHA58_23815)	clpX	5275080..5276366 (+)	1287	WP_116512991.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA58_RS23795 (OHA58_23820)	-	5276448..5277422 (-)	975	WP_405481231.1	hypothetical protein	-
OHA58_RS23800 (OHA58_23825)	-	5277608..5280238 (+)	2631	WP_405481233.1	valine--tRNA ligase	-
OHA58_RS23805 (OHA58_23830)	-	5280382..5281014 (-)	633	WP_405481235.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46850.55 Da
• Isoelectric Point: 4.7856

>NTDB_id=658764 OHA58_RS23790 WP_116512991.1 5275080..5276366(+) (clpX) [Streptomyces sp. NBC_00009]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELSKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIHSKRELEEKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILLEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRRTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
AEAVHSNVNPTLIPRDVRGSGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=658764 OHA58_RS23790 WP_116512991.1 5275080..5276366(+) (clpX) [Streptomyces sp. NBC_00009]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAAGAACTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAAGGCTATGTCGTCGGCCAGGAGGCC
GCGAAGAAAGCCCTCTCGGTCGCTGTGTACAACCATTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGAGCCCAGGGACG
CGACGACGCGATCGAGCTGTCGAAGTCCAACATCCTGCTCCTGGGCCCCACGGGCTCGGGCAAGACCCTCCTGGCCCAGA
CCCTGGCCCGCATGCTGAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCCGGCTATGTGGGCGAGGAC
GTCGAGAACATCCTCCTGAAACTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAGAACCCGTCGATCACGCGTGATGTGTCCGGTGAGGGCGTCCAGCAGGCCC
TGCTCAAGATCCTGGAAGGCACCACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCAGGCCTGGAGAAGATCATCGAGTCGCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCACTCCAAGCGCGAGCTGGAGGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTCCTGGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCGCACCGGCGCGCGCGGCCTGC
GCGCGATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCCTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCGGAGGCCGTCCACTCGAACGTGAACCCGACGCTGATCCCCCGCGACGTCCGCGGTTCGGGCAGCGGAGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.925	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.479	96.495	0.526