Detailed information NTG0658073

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG438_RS30155
• Genome accession: NZ_CP108291
• Coordinates: 6717636..6718922 (+)
• Length: 428 a.a.
• NCBI ID: WP_326723115.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00035
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6712636..6723922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG438_RS30125 (OG438_30110)	-	6713381..6713575 (+)	195	WP_266462266.1	hypothetical protein	-
OG438_RS30140 (OG438_30125)	tig	6714246..6715634 (+)	1389	WP_405925606.1	trigger factor	-
OG438_RS30145 (OG438_30130)	clpP	6716072..6716677 (+)	606	WP_186001018.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG438_RS30150 (OG438_30135)	clpP	6716795..6717475 (+)	681	WP_266827428.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG438_RS30155 (OG438_30140)	clpX	6717636..6718922 (+)	1287	WP_326723115.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG438_RS30160 (OG438_30145)	-	6719011..6719988 (-)	978	WP_326723116.1	hypothetical protein	-
OG438_RS30165 (OG438_30150)	-	6720125..6722749 (+)	2625	WP_405925607.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46924.78 Da
• Isoelectric Point: 4.7866

>NTDB_id=658073 OG438_RS30155 WP_326723115.1 6717636..6718922(+) (clpX) [Streptomyces sp. NBC_00035]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENSTGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKREIEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFESEALEAIADQAILRKTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
AEVVHSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=658073 OG438_RS30155 WP_326723115.1 6717636..6718922(+) (clpX) [Streptomyces sp. NBC_00035]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAAGAACTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGCCAGGAGCCG
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACAGCACGGGTCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATTCTGCTCCTCGGCCCGACGGGTTCCGGCAAGACCCTTCTCGCGCAGA
CCCTGGCCCGCATGCTGAACGTTCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTCATCCAGGCAGCGGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGCGAGAACCCCTCGATCACCCGCGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACCACGGCCTCGGTCCCGCCGCAGGGTGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGCGGGCCGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGATCGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTTCACAACCTGGACCGC
GAGGCCCTCCTCCAGATCCTCGTCGAGCCCCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGAGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCAAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCGGAGGTCGTCCACTCGAACGTGAACCCGACGCTGATCCCGCGGGACGCGCGGGGACGCGGTCCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.531	94.159	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526