Detailed information NTG0658049

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: MJ595_RS07975
• Genome accession: NZ_CP092489
• Coordinates: 1814576..1815694 (-)
• Length: 372 a.a.
• NCBI ID: WP_263081921.1
• Uniprot ID: -
• Organism: Endozoicomonas sp. Mp262
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1809576..1820694

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MJ595_RS07950	dnaJ	1810870..1812015 (+)	1146	WP_263081918.1	molecular chaperone DnaJ	-
MJ595_RS07955	-	1812109..1812456 (+)	348	WP_263081919.1	HigA family addiction module antitoxin	-
MJ595_RS07960	-	1813090..1813317 (-)	228	WP_263081920.1	hypothetical protein	-
MJ595_RS07965	-	1813314..1813763 (-)	450	WP_263322472.1	AAA family ATPase	-
MJ595_RS07970	-	1813818..1813949 (-)	132	Protein_1552	ParA family protein	-
MJ595_RS07975	pilU	1814576..1815694 (-)	1119	WP_263081921.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
MJ595_RS07980	dapB	1816119..1816922 (+)	804	WP_263081922.1	4-hydroxy-tetrahydrodipicolinate reductase	-
MJ595_RS07985	-	1816986..1817192 (-)	207	Protein_1555	BrnA antitoxin family protein	-
MJ595_RS07990	-	1817227..1817460 (-)	234	WP_263081923.1	BrnT family toxin	-
MJ595_RS07995	-	1817484..1818380 (+)	897	WP_263081924.1	hypothetical protein	-
MJ595_RS08000	-	1818488..1819039 (-)	552	WP_263081925.1	hypothetical protein	-
MJ595_RS08005	-	1819920..1820219 (+)	300	WP_263081926.1	hypothetical protein	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41457.68 Da
• Isoelectric Point: 7.0053

>NTDB_id=658049 MJ595_RS07975 WP_263081921.1 1814576..1815694(-) (pilU) [Endozoicomonas sp. Mp262]
MDIHKALRLVVEKNSSELFVTVGYPPCLKINNQITPISKQPLTRPLAEQAIKALMDSQRFEQFCKTHESNYAVHLDNIGR
FRVSAFYQKGEPGMVIRKINTTIPTLPELGLPTHLGDQVLQPRGLILFVGAAGSGKTTSMAALIGHRNRAGTGHIITIED
PIEFIHEHKNCIITQRDVGLDTESFEQGLANALRQAPNVVAIGEIRSAKVMMHAIEFVETGHLCLATLHANNAYQALERV
IHFFPQEQRPQLLMDLSLNTQAIIGQQLITSKEQNKVYPAVEVLLNTPRIADLIKQGQIDELREVMGKSREQGMQTFDQS
LYDLYESGKITYEKALQHATSSNDLRLMIKLSGKMPPGHEGINIDSLKVSDD

Nucleotide

• Length: 1119 bp

>NTDB_id=658049 MJ595_RS07975 WP_263081921.1 1814576..1815694(-) (pilU) [Endozoicomonas sp. Mp262]
ATGGATATCCATAAAGCCCTAAGGCTTGTCGTTGAAAAGAATAGCTCAGAGCTTTTCGTCACCGTTGGCTACCCCCCCTG
CCTGAAAATAAACAATCAAATTACCCCTATTAGCAAACAGCCCCTCACCAGACCACTGGCAGAGCAAGCAATAAAAGCCT
TGATGGATTCACAACGGTTTGAGCAGTTCTGTAAAACCCATGAAAGCAACTATGCGGTACATCTGGATAATATTGGTCGC
TTCCGGGTTAGTGCATTTTATCAAAAGGGCGAACCCGGAATGGTTATCCGAAAAATCAACACCACAATCCCCACACTCCC
GGAACTGGGCTTGCCGACGCACTTGGGTGACCAGGTTCTGCAACCCCGGGGGCTTATTCTGTTTGTTGGAGCTGCCGGCT
CAGGCAAAACAACGTCAATGGCAGCCCTGATCGGTCATCGCAACCGGGCAGGAACCGGCCATATCATCACTATCGAAGAC
CCTATTGAGTTTATCCATGAACACAAAAACTGCATTATTACCCAACGGGATGTAGGCCTTGACACGGAAAGTTTTGAACA
AGGCCTTGCCAATGCGCTCCGGCAGGCTCCCAATGTTGTCGCCATTGGAGAAATCCGATCCGCAAAGGTTATGATGCATG
CCATTGAGTTTGTGGAAACCGGTCATCTCTGCCTCGCCACCTTACATGCCAATAACGCTTATCAGGCGCTTGAGCGAGTC
ATTCACTTTTTCCCCCAGGAGCAGCGCCCGCAATTATTGATGGACTTATCTCTCAATACCCAGGCCATTATTGGCCAGCA
ACTTATAACCTCAAAAGAACAAAATAAAGTATACCCTGCCGTAGAAGTACTCCTGAACACGCCCCGTATAGCCGACCTAA
TCAAACAGGGGCAGATTGATGAACTAAGAGAAGTGATGGGCAAATCCAGAGAACAGGGAATGCAGACCTTTGACCAGTCT
CTGTATGACTTGTATGAATCTGGAAAAATCACCTATGAAAAAGCCTTGCAACATGCCACCTCATCCAATGACCTCAGACT
CATGATCAAACTAAGCGGGAAGATGCCTCCCGGGCACGAGGGCATTAATATTGACTCCCTGAAAGTGTCTGATGATTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (92-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	53.581	100	0.543
pilU	Acinetobacter baylyi ADP1	53.824	94.892	0.511
pilU	Vibrio cholerae strain A1552	52.286	94.086	0.492