Detailed information NTG0657942

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG374_RS16025
• Genome accession: NZ_CP108287
• Coordinates: 3423965..3425251 (-)
• Length: 428 a.a.
• NCBI ID: WP_202201570.1
• Uniprot ID: A0ABQ3TIA3
• Organism: Streptomyces sp. NBC_00040
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3418965..3430251

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG374_RS16015 (OG374_15890)	-	3420214..3422835 (-)	2622	WP_202201572.1	valine--tRNA ligase	-
OG374_RS16020 (OG374_15895)	-	3422963..3423895 (+)	933	WP_202201571.1	hypothetical protein	-
OG374_RS16025 (OG374_15900)	clpX	3423965..3425251 (-)	1287	WP_202201570.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG374_RS16030 (OG374_15905)	clpP	3425405..3426073 (-)	669	WP_272934852.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG374_RS16035 (OG374_15910)	clpP	3426129..3426746 (-)	618	WP_030008567.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG374_RS16040 (OG374_15915)	tig	3427023..3428411 (-)	1389	WP_202201569.1	trigger factor	-
OG374_RS16055 (OG374_15930)	-	3428969..3429571 (-)	603	WP_252309253.1	hypothetical protein	-
OG374_RS16060 (OG374_15935)	-	3429574..3429768 (-)	195	WP_030008564.1	membrane protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46860.78 Da
• Isoelectric Point: 4.8189

>NTDB_id=657942 OG374_RS16025 WP_202201570.1 3423965..3425251(-) (clpX) [Streptomyces sp. NBC_00040]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFERGALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=657942 OG374_RS16025 WP_202201570.1 3423965..3425251(-) (clpX) [Streptomyces sp. NBC_00040]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTCTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAGCTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCGGTAGCGGTCTACAACCACTACAAGCGGGTGCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCGGGCAAGACGCTGCTCGCGCAGA
CGCTCGCCCGCATGCTGAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACGACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGTTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCCGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGCTGTTCGAACTCGATGGTGT
GGAGCTGGACTTCGAGCGCGGGGCGCTTGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCGGACGTGGTCCGCTCCAACGTCAACCCGACGCTGGTCCCGCGGATCGTCCCGAAGGACCAGGGCCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516