Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   MJX77_RS10105 Genome accession   NZ_CP092454
Coordinates   2125202..2127625 (+) Length   807 a.a.
NCBI ID   WP_252058926.1    Uniprot ID   -
Organism   Acinetobacter sp. AHP123     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2120202..2132625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJX77_RS10075 - 2120353..2121294 (-) 942 WP_004790613.1 hypothetical protein -
  MJX77_RS10080 - 2121540..2122028 (+) 489 WP_014207405.1 YaiI/YqxD family protein -
  MJX77_RS10085 - 2122036..2122944 (+) 909 WP_252058925.1 EamA family transporter -
  MJX77_RS10090 - 2122974..2123078 (-) 105 Protein_1930 PilZ domain-containing protein -
  MJX77_RS10095 - 2123204..2124439 (+) 1236 WP_004790618.1 lipoprotein-releasing ABC transporter permease subunit -
  MJX77_RS10100 lolD 2124432..2125118 (+) 687 WP_151767132.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  MJX77_RS10105 comA/comEC 2125202..2127625 (+) 2424 WP_252058926.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MJX77_RS10110 - 2127587..2128570 (-) 984 WP_252058928.1 lysophospholipid acyltransferase family protein -
  MJX77_RS10115 sppA 2128704..2129720 (+) 1017 WP_004790623.1 signal peptide peptidase SppA -
  MJX77_RS10120 - 2129742..2130551 (+) 810 WP_252058930.1 alpha/beta hydrolase -
  MJX77_RS10125 purN 2130619..2131248 (-) 630 WP_004790628.1 phosphoribosylglycinamide formyltransferase -
  MJX77_RS10130 purM 2131245..2132315 (-) 1071 WP_252058932.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 807 a.a.        Molecular weight: 92224.61 Da        Isoelectric Point: 8.8209

>NTDB_id=657733 MJX77_RS10105 WP_252058926.1 2125202..2127625(+) (comA/comEC) [Acinetobacter sp. AHP123]
MLKLILVGWIVGIAFMGIDLPLITQYGWIGKVLLFICLMFYIFKRHLVVNRPILKGVYYLICGLSLFVIGHQYAQHALNE
RLQLREMQPESLEIVVYIDRISEEKDNKTQQLAQVLGRSSDVVNWLLYLKNENESALIEGPKLQLGHYYRISGKTRPAHS
YAVSGAFDQEQWFIQRNIMSGFSVQHIEPLNSNEIYRLGYQNHLKQQQKFFTRQQLNIEKLRLKFRLILKKSPFQNKGLL
LALLTGDESLLNEDIKNQFKQLGISHLLAISGPHVLIFAILLSWGLHQLVQRYYPQLYLWQPKQILAMIPLCFGVLIYTA
FVGFEIPALRTLLSIFLFAFLLLVKLPVKPFSLLVYSASLLLLFDPFSVLSAGFWLSYGSCFILLRIYQTIVQAPNLASL
SLLSRIILLAKTLIESQSKIFIALCPLMLIFFQQISWVAPLTNIIAVPLLGGVIVPLNIFAACVWLIFNSPGNALFQLND
ILLSMVLTCFSLLEKLSLPLQGFSLTPLALIGLSCAIIILFLPRGVLPKFWSLICCLPLVIPNKTSQQIQLNIIDVGQGQ
AIFLQHPEQTWLIDTGGSYDEKAFSIGQNVVIPYLRQKGIKQLDHVVLSHLDQDHSGAFPFIAQAFPIKQVISNQLWAEK
VKEPFTYCHQGQKWQYPQLDIEILWPKENDLNLVPTNQNEYSCVVYIHLKQVRDYQNYLIMGDAGWEAEYQLIKEYPDLK
VDVLVLGHHGSKHSSAYDFLATLNPKLVIASAGFNNRYGHPSKEVLARIQELNIPFKSTVEQGTLSFVSENHQMILYTRR
FERTWLH

Nucleotide


Download         Length: 2424 bp        

>NTDB_id=657733 MJX77_RS10105 WP_252058926.1 2125202..2127625(+) (comA/comEC) [Acinetobacter sp. AHP123]
ATGTTAAAGCTTATTTTAGTGGGGTGGATTGTAGGTATTGCATTTATGGGAATAGATCTTCCTCTCATAACGCAATATGG
TTGGATTGGTAAAGTTTTGCTCTTTATCTGCTTAATGTTTTATATATTTAAGCGCCATCTTGTTGTAAATCGTCCTATAT
TAAAAGGAGTTTATTATTTAATCTGTGGTCTAAGCCTTTTTGTTATAGGCCATCAGTATGCTCAACATGCCTTAAATGAA
AGACTACAACTACGGGAGATGCAACCTGAGTCTTTAGAGATTGTTGTTTATATAGACCGAATAAGTGAAGAAAAAGATAA
TAAGACACAGCAACTCGCTCAGGTTCTAGGGCGGTCATCCGATGTGGTGAATTGGTTGTTATATTTAAAAAATGAAAATG
AGAGTGCATTAATAGAGGGGCCAAAATTACAATTAGGTCATTACTATCGAATTTCGGGTAAAACCAGACCAGCTCATAGT
TATGCAGTATCAGGTGCTTTTGATCAAGAACAATGGTTCATTCAACGAAATATAATGTCAGGTTTCAGTGTTCAACATAT
TGAGCCTTTAAACTCGAATGAAATTTATCGGTTGGGTTATCAAAATCACTTAAAACAGCAACAAAAATTTTTTACTAGAC
AACAGTTAAATATAGAAAAACTCCGTCTAAAATTTAGATTAATTCTAAAAAAATCTCCTTTTCAGAATAAAGGATTGTTA
TTAGCGCTTTTAACAGGGGATGAAAGTCTTTTAAATGAAGACATTAAAAATCAATTTAAGCAGTTAGGAATCTCTCATTT
GTTGGCCATTTCAGGGCCTCATGTCCTCATTTTTGCAATCTTGTTATCTTGGGGATTACATCAATTAGTACAACGTTATT
ATCCTCAGCTTTATTTGTGGCAACCCAAGCAAATTTTAGCAATGATTCCGTTATGCTTTGGAGTTTTGATTTATACAGCT
TTTGTCGGCTTTGAAATTCCAGCCTTAAGAACTTTACTCTCAATATTTTTATTTGCCTTTTTATTGTTAGTCAAACTGCC
AGTTAAGCCATTTTCGCTATTGGTTTATAGCGCAAGTCTACTTTTACTTTTTGATCCATTTAGTGTTTTATCAGCAGGTT
TTTGGCTCTCTTATGGTTCTTGCTTTATTTTATTACGCATTTATCAAACCATAGTACAGGCACCAAATCTTGCCTCATTG
AGTTTGCTATCTAGAATAATTCTTTTAGCTAAAACCCTAATTGAATCTCAGAGCAAAATATTTATTGCTCTATGTCCTCT
AATGCTGATTTTCTTTCAACAGATTTCATGGGTAGCACCTCTTACAAATATTATTGCTGTTCCTCTGTTAGGAGGAGTTA
TTGTTCCTTTAAATATTTTCGCTGCTTGTGTGTGGCTTATTTTTAATTCACCTGGAAATGCGCTCTTTCAGCTTAATGAT
ATTTTGCTCAGTATGGTGCTGACATGTTTTAGTCTTTTAGAGAAATTATCTCTACCGTTGCAAGGTTTTAGTCTGACACC
ACTGGCTTTGATAGGCTTAAGCTGTGCCATTATTATTTTATTTTTACCGCGTGGTGTTTTACCAAAATTTTGGAGTCTTA
TATGTTGTTTACCCTTAGTCATTCCGAATAAAACCTCACAGCAAATTCAATTAAATATTATAGACGTAGGCCAAGGACAA
GCGATTTTTCTACAACATCCAGAGCAGACATGGTTAATTGATACGGGTGGTTCTTATGATGAAAAGGCTTTCAGCATTGG
TCAAAATGTAGTAATTCCATATTTACGTCAGAAAGGTATTAAGCAACTAGATCATGTGGTGTTATCTCATCTTGACCAAG
ATCATAGTGGGGCATTTCCTTTTATCGCTCAGGCTTTTCCTATCAAACAAGTCATATCAAATCAGCTATGGGCAGAGAAG
GTAAAAGAACCATTTACCTATTGTCATCAAGGGCAAAAATGGCAATATCCACAGTTAGATATTGAGATACTTTGGCCTAA
AGAAAATGATTTAAATTTAGTTCCTACTAACCAAAATGAATATTCTTGTGTTGTTTATATTCATTTAAAACAAGTAAGGG
ATTATCAGAATTATTTAATTATGGGGGATGCGGGATGGGAAGCAGAATATCAATTGATAAAAGAATATCCTGATTTAAAG
GTAGATGTTTTGGTATTAGGTCATCATGGAAGTAAACATAGTTCGGCTTATGACTTTTTAGCGACGTTAAACCCCAAGCT
TGTTATTGCTTCTGCCGGCTTTAATAACCGATATGGTCATCCAAGCAAAGAGGTTTTAGCGAGAATACAAGAACTTAATA
TTCCATTTAAAAGCACAGTTGAGCAAGGAACATTAAGTTTTGTATCTGAGAATCATCAAATGATTTTATACACTCGACGT
TTCGAGCGTACTTGGCTCCACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

70.347

99.876

0.703

  comA/comEC Acinetobacter baumannii strain A118

69.603

99.876

0.695

  comA/comEC Acinetobacter baylyi ADP1

49.692

100

0.501