Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   MJX77_RS02425 Genome accession   NZ_CP092454
Coordinates   509107..509511 (-) Length   134 a.a.
NCBI ID   WP_252060475.1    Uniprot ID   -
Organism   Acinetobacter sp. AHP123     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 504107..514511
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJX77_RS02395 - 504189..504458 (-) 270 WP_013198928.1 HPr family phosphocarrier protein -
  MJX77_RS02400 rapZ 504455..505306 (-) 852 WP_004794551.1 RNase adapter RapZ -
  MJX77_RS02405 panC 505331..506179 (-) 849 WP_252060474.1 pantoate--beta-alanine ligase -
  MJX77_RS02410 panB 506183..506992 (-) 810 WP_004794557.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  MJX77_RS02415 folK 507039..507521 (-) 483 WP_013198930.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  MJX77_RS02420 pcnB 507518..508981 (-) 1464 WP_013198931.1 polynucleotide adenylyltransferase PcnB -
  MJX77_RS02425 comEA 509107..509511 (-) 405 WP_252060475.1 ComEA family DNA-binding protein Machinery gene
  MJX77_RS02430 mazG 509480..510286 (-) 807 WP_252060476.1 nucleoside triphosphate pyrophosphohydrolase -
  MJX77_RS02435 - 510399..511172 (+) 774 WP_252060477.1 SDR family oxidoreductase -
  MJX77_RS02440 - 511221..513527 (-) 2307 WP_005302395.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 15314.61 Da        Isoelectric Point: 10.4153

>NTDB_id=657703 MJX77_RS02425 WP_252060475.1 509107..509511(-) (comEA) [Acinetobacter sp. AHP123]
MHLSMNLWKSKSYIFIILFWSLISSTFVQAQSFDQNFKEWKAKQQMYDQKLSMQHASHSSVPKSSAMTDSSGQVHLNQAN
IDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKSVKGIGPAIFEKNKARLTL

Nucleotide


Download         Length: 405 bp        

>NTDB_id=657703 MJX77_RS02425 WP_252060475.1 509107..509511(-) (comEA) [Acinetobacter sp. AHP123]
ATGCATCTCAGCATGAATCTTTGGAAGAGTAAGTCTTATATTTTTATTATTTTATTTTGGAGCCTGATTTCTTCAACCTT
TGTTCAGGCTCAATCTTTTGATCAAAATTTTAAGGAGTGGAAGGCTAAACAGCAGATGTATGATCAGAAGTTGAGCATGC
AACACGCCTCGCATTCTAGCGTTCCAAAAAGCTCTGCCATGACTGACTCTTCGGGACAAGTTCACTTGAATCAAGCCAAT
ATTGATGAGCTTCAAAAGCTAAAAGGTATTGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACCGTCAAAAGAATGGTGG
CTTTAAAAATATTGATGAATTTAAAAGTGTAAAGGGTATTGGTCCAGCCATTTTTGAAAAGAATAAAGCGCGTTTGACTT
TATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(71-133)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

64.964

100

0.664
  comEA Acinetobacter baumannii D1279779

64.964

100

0.664
  comEA Acinetobacter baylyi ADP1

43.548

92.537

0.403