Detailed information NTG0657415

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG953_RS28920
• Genome accession: NZ_CP108256
• Coordinates: 6150964..6152262 (+)
• Length: 432 a.a.
• NCBI ID: WP_114244485.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00057
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6145964..6157262

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG953_RS28890 (OG953_28840)	-	6146978..6147172 (+)	195	WP_405687938.1	hypothetical protein	-
OG953_RS28905 (OG953_28855)	tig	6147777..6149174 (+)	1398	WP_405687939.1	trigger factor	-
OG953_RS28910 (OG953_28860)	-	6149439..6150044 (+)	606	WP_176729207.1	ATP-dependent Clp protease proteolytic subunit	-
OG953_RS28915 (OG953_28865)	clpP	6150126..6150806 (+)	681	WP_327275258.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG953_RS28920 (OG953_28870)	clpX	6150964..6152262 (+)	1299	WP_114244485.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG953_RS28925 (OG953_28875)	-	6152333..6153388 (-)	1056	WP_405687941.1	hypothetical protein	-
OG953_RS28930 (OG953_28880)	-	6153529..6156150 (+)	2622	WP_405687943.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47287.07 Da
• Isoelectric Point: 4.8306

>NTDB_id=657415 OG953_RS28920 WP_114244485.1 6150964..6152262(+) (clpX) [Streptomyces sp. NBC_00057]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=657415 OG953_RS28920 WP_114244485.1 6150964..6152262(+) (clpX) [Streptomyces sp. NBC_00057]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTTCTCGCGCAGA
CCCTGGCCCGTATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCT
TGTTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGTCTGGAGAGGATCATCGAGTCGCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCTG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTGCCTGTCCTCACCTCGGTCCACAACCTGGACCGT
GAGGCGCTGCTGCAGATCCTCGTAGAGCCGCGCAACGCGCTGGTGAAGCAGTATCAACGACTGTTCGAACTCGACGGTGT
CGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTCCGCGGCACCGGCGCGCGTGGCCTGC
GGGCCATCATGGAAGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTCGTCCGCAACAACGTGAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGACGGGCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509