Detailed information NTG0656956

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHU33_RS31130
• Genome accession: NZ_CP108237
• Coordinates: 6708684..6709973 (+)
• Length: 429 a.a.
• NCBI ID: WP_266514322.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00079
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6703684..6714973

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHU33_RS31100 (OHU33_30985)	-	6704646..6704858 (+)	213	Protein_6153	cation transporter	-
OHU33_RS31115 (OHU33_31000)	tig	6705477..6706874 (+)	1398	WP_266514325.1	trigger factor	-
OHU33_RS31120 (OHU33_31005)	clpP	6707155..6707775 (+)	621	WP_323178394.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHU33_RS31125 (OHU33_31010)	clpP	6707825..6708505 (+)	681	WP_323178393.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHU33_RS31130 (OHU33_31015)	clpX	6708684..6709973 (+)	1290	WP_266514322.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHU33_RS31135 (OHU33_31020)	-	6710217..6711179 (-)	963	WP_266514319.1	hypothetical protein	-
OHU33_RS31140 (OHU33_31025)	-	6711317..6713941 (+)	2625	WP_266514315.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46864.68 Da
• Isoelectric Point: 4.8160

>NTDB_id=656956 OHU33_RS31130 WP_266514322.1 6708684..6709973(+) (clpX) [Streptomyces sp. NBC_00079]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGANGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLELQSKDQFGDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVVT
ADVVHSNVNPTLIPRDARNGRGPGEQKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=656956 OHU33_RS31130 WP_266514322.1 6708684..6709973(+) (clpX) [Streptomyces sp. NBC_00079]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTGCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCCCTCTCCGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCCAACGGCCG
TGACGACGCGATCGAGTTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTGGCCCAGA
CCCTGGCCCGCATGCTGAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTCACGGAGGCGGGTTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGAGGAAGAGTGAGAACCCCTCGATCACTCGCGACGTGTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCTGGAGCTGCAGTCCAAGGACCAGTTCGGGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCATCACCTCGGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGTAACGCGCTGGTGAAGCAGTACCAACGTCTCTTCGAACTCGACGGTGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGAGTCGTCGTCACA
GCGGACGTCGTCCACTCGAACGTGAACCCGACCCTGATCCCGCGCGACGCGCGGAACGGGCGGGGGCCGGGGGAGCAGAA
GACGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.706	0.59
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	95.804	0.517