Detailed information NTG0656542

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG786_RS20585
• Genome accession: NZ_CP108217
• Coordinates: 4803655..4804953 (+)
• Length: 432 a.a.
• NCBI ID: WP_275494203.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00101
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4798655..4809953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG786_RS20555 (OG786_20570)	-	4799461..4799655 (+)	195	WP_266704317.1	hypothetical protein	-
OG786_RS20570 (OG786_20585)	tig	4800383..4801774 (+)	1392	WP_405459619.1	trigger factor	-
OG786_RS20575 (OG786_20590)	-	4802119..4802724 (+)	606	WP_275496154.1	ATP-dependent Clp protease proteolytic subunit	-
OG786_RS20580 (OG786_20595)	clpP	4802814..4803497 (+)	684	WP_275494202.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG786_RS20585 (OG786_20600)	clpX	4803655..4804953 (+)	1299	WP_275494203.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG786_RS20590 (OG786_20605)	-	4805557..4806561 (-)	1005	WP_405459620.1	hypothetical protein	-
OG786_RS20595 (OG786_20610)	-	4806698..4809319 (+)	2622	WP_275494205.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47389.20 Da
• Isoelectric Point: 4.8852

>NTDB_id=656542 OG786_RS20585 WP_275494203.1 4803655..4804953(+) (clpX) [Streptomyces sp. NBC_00101]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGSSRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIEARSGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=656542 OG786_RS20585 WP_275494203.1 4803655..4804953(+) (clpX) [Streptomyces sp. NBC_00101]
GTGGCACGCATCGGTGATGGCGGCGACTTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAACTCGCCGAGACCT
CGGAAGTGCGCTGGGAAGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGAGGTTCGAGTCG
GGACGACGCGATCGAGCTCGCCAAGTCGAACATCCTCCTGCTGGGCCCGACGGGTTCCGGCAAGACGCTGCTGGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGATACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGACGTCTCGGGCGAGGGCGTCCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGGGGCGCCTTCTCCGGTCTGGAGAAGATCATCGAGGCCCGGTCCGGTGC
CAAGGGCATCGGGTTCGGCGCGACGATCCGTTCCAAGCGGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTCCCCGTCCTCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATTCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTCTTCGAACTCGACGGAGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGGCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTGGTCATCACC
CCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGCCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516