Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MIH18_RS14200 Genome accession   NZ_CP092284
Coordinates   3031684..3032076 (-) Length   130 a.a.
NCBI ID   WP_014872951.1    Uniprot ID   M1FH24
Organism   Marinobacter sp. M3C     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3026684..3037076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MIH18_RS14185 (MIH18_14180) - 3028560..3030626 (-) 2067 WP_249012683.1 methyl-accepting chemotaxis protein -
  MIH18_RS14190 (MIH18_14185) - 3030720..3031268 (-) 549 WP_249012684.1 chemotaxis protein CheW -
  MIH18_RS14195 (MIH18_14190) pilH 3031289..3031651 (-) 363 WP_249012685.1 twitching motility response regulator PilH -
  MIH18_RS14200 (MIH18_14195) pilG 3031684..3032076 (-) 393 WP_014872951.1 twitching motility response regulator PilG Regulator
  MIH18_RS14205 (MIH18_14200) gshB 3032375..3033328 (+) 954 WP_249012686.1 glutathione synthase -
  MIH18_RS14210 (MIH18_14205) - 3033372..3034235 (+) 864 WP_249012687.1 TonB family protein -
  MIH18_RS14215 (MIH18_14210) - 3034232..3034798 (+) 567 WP_249012688.1 YqgE/AlgH family protein -
  MIH18_RS14220 (MIH18_14215) ruvX 3034791..3035213 (+) 423 WP_249012689.1 Holliday junction resolvase RuvX -
  MIH18_RS14225 (MIH18_14220) pyrR 3035287..3035790 (+) 504 WP_249012690.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  MIH18_RS14230 (MIH18_14225) - 3035849..3036874 (+) 1026 WP_249006668.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14510.85 Da        Isoelectric Point: 8.4950

>NTDB_id=656517 MIH18_RS14200 WP_014872951.1 3031684..3032076(-) (pilG) [Marinobacter sp. M3C]
MDDNFGNLKVMVIDDSKTIRRTAETLLKKVGCDVITATDGFDALAKIADSKPDIIFVDIMMPRLDGYQTCALIKNNSTFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRHFVPQAQH

Nucleotide


Download         Length: 393 bp        

>NTDB_id=656517 MIH18_RS14200 WP_014872951.1 3031684..3032076(-) (pilG) [Marinobacter sp. M3C]
ATGGACGACAACTTCGGGAACTTGAAAGTCATGGTAATCGACGACAGCAAAACGATTCGTCGCACTGCCGAAACCCTTTT
AAAAAAAGTGGGTTGTGATGTCATAACTGCGACTGACGGTTTCGATGCGCTGGCCAAAATTGCCGACTCCAAACCCGACA
TTATTTTTGTTGATATCATGATGCCGCGGCTAGACGGTTATCAGACCTGCGCCCTTATCAAGAACAACTCCACCTTCAAG
AAAACGCCGGTCATCATGCTGTCCAGTAAAGATGGCCTGTTTGACAAGGCAAAAGGCCGTATTGTGGGTTCCGATCAGTA
TCTGACCAAGCCATTCAGCAAAGACGAACTGCTTAATACCATTCGTCATTTCGTGCCACAGGCGCAGCACTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M1FH24

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754
  vicR Streptococcus mutans UA159

43.86

87.692

0.385
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362