Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MIH16_RS20765 Genome accession   NZ_CP092283
Coordinates   4421009..4421401 (+) Length   130 a.a.
NCBI ID   WP_014872951.1    Uniprot ID   M1FH24
Organism   Marinobacter sp. M4C     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4416009..4426401
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MIH16_RS20735 (MIH16_20735) - 4416212..4417237 (-) 1026 WP_249006668.1 aspartate carbamoyltransferase catalytic subunit -
  MIH16_RS20740 (MIH16_20740) pyrR 4417296..4417799 (-) 504 WP_249006669.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  MIH16_RS20745 (MIH16_20745) ruvX 4417872..4418294 (-) 423 WP_249006670.1 Holliday junction resolvase RuvX -
  MIH16_RS20750 (MIH16_20750) - 4418287..4418853 (-) 567 WP_098420745.1 YqgE/AlgH family protein -
  MIH16_RS20755 (MIH16_20755) - 4418850..4419713 (-) 864 WP_249006671.1 TonB family protein -
  MIH16_RS20760 (MIH16_20760) gshB 4419757..4420710 (-) 954 WP_249006672.1 glutathione synthase -
  MIH16_RS20765 (MIH16_20765) pilG 4421009..4421401 (+) 393 WP_014872951.1 twitching motility response regulator PilG Regulator
  MIH16_RS20770 (MIH16_20770) pilH 4421434..4421796 (+) 363 WP_249006673.1 twitching motility response regulator PilH -
  MIH16_RS20775 (MIH16_20775) - 4421817..4422365 (+) 549 WP_249006674.1 chemotaxis protein CheW -
  MIH16_RS20780 (MIH16_20780) - 4422459..4424525 (+) 2067 WP_249006675.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14510.85 Da        Isoelectric Point: 8.4950

>NTDB_id=656496 MIH16_RS20765 WP_014872951.1 4421009..4421401(+) (pilG) [Marinobacter sp. M4C]
MDDNFGNLKVMVIDDSKTIRRTAETLLKKVGCDVITATDGFDALAKIADSKPDIIFVDIMMPRLDGYQTCALIKNNSTFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRHFVPQAQH

Nucleotide


Download         Length: 393 bp        

>NTDB_id=656496 MIH16_RS20765 WP_014872951.1 4421009..4421401(+) (pilG) [Marinobacter sp. M4C]
ATGGACGACAACTTCGGGAACTTGAAAGTCATGGTAATCGACGACAGCAAAACGATTCGTCGCACTGCCGAAACCCTTTT
AAAAAAAGTGGGTTGTGATGTCATAACCGCGACTGACGGTTTCGATGCGCTGGCCAAAATTGCCGACTCCAAACCCGACA
TTATTTTTGTTGATATCATGATGCCGCGGCTAGACGGTTATCAGACCTGCGCCCTTATCAAGAACAACTCCACCTTCAAG
AAAACGCCGGTCATCATGCTGTCCAGTAAAGATGGCCTGTTTGACAAGGCAAAAGGCCGTATTGTGGGTTCCGATCAGTA
TCTGACCAAGCCATTCAGCAAAGACGAACTGCTTAATACCATTCGTCATTTCGTGCCACAGGCGCAGCACTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M1FH24

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754
  vicR Streptococcus mutans UA159

43.86

87.692

0.385
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362