Detailed information NTG0656283

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: MF598_RS18215
• Genome accession: NZ_CP092185
• Coordinates: 3649094..3650242 (-)
• Length: 382 a.a.
• NCBI ID: WP_029326229.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain K203
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3644094..3655242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MF598_RS18185 (MF598_18185)	-	3644226..3644984 (-)	759	WP_003156330.1	ABC transporter ATP-binding protein	-
MF598_RS18190 (MF598_18190)	-	3644978..3645925 (-)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
MF598_RS18195 (MF598_18195)	ceuB	3645915..3646868 (-)	954	WP_032872883.1	ABC transporter permease	Machinery gene
MF598_RS18200 (MF598_18200)	-	3647282..3648646 (+)	1365	WP_007609394.1	aspartate kinase	-
MF598_RS18205 (MF598_18205)	-	3648741..3648842 (+)	102	WP_239033885.1	YjcZ family sporulation protein	-
MF598_RS18210 (MF598_18210)	phrC	3648991..3649110 (-)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
MF598_RS18215 (MF598_18215)	rapC	3649094..3650242 (-)	1149	WP_029326229.1	Rap family tetratricopeptide repeat protein	Regulator
MF598_RS18220 (MF598_18220)	-	3650401..3651828 (-)	1428	WP_224224030.1	HAMP domain-containing sensor histidine kinase	-
MF598_RS18225 (MF598_18225)	-	3651815..3652498 (-)	684	WP_007609386.1	response regulator transcription factor	-
MF598_RS18230 (MF598_18230)	-	3652711..3654141 (+)	1431	WP_224224029.1	ABC transporter permease	-
MF598_RS18235 (MF598_18235)	-	3654156..3654839 (+)	684	WP_045206762.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45406.59 Da
• Isoelectric Point: 4.9221

>NTDB_id=656283 MF598_RS18215 WP_029326229.1 3649094..3650242(-) (rapC) [Bacillus velezensis strain K203]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFSYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=656283 MF598_RS18215 WP_029326229.1 3649094..3650242(-) (rapC) [Bacillus velezensis strain K203]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGAGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCAGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568